ICEberg
I. Information of ICE
ICEberg ID965
Name ICEclc(LB400) This is a predicted ICE derived from literature
FamilyICEclc
OrganismBurkholderia xenovorans LB400
Size (bp)124 kb
GC content [Genome] (%)-
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide Sequence-
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEclc(LB400) is not available.

 

The gene information of ICEclc(LB400) is not available.
ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Miyazaki R; Bertelli C; Benaglio P; Canton J; De Coi N; Gharib WH; Gjoksi B; Goesmann A; Greub G; Harshman K; Linke B; Mikulic J; Mueller L; Nicolas D; Robinson-Rechavi M; Rivolta C; Roggo C; Roy S; Sentchilo V; Siebenthal AV; Falquet L; van der Meer JR (2015). Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds. Environ Microbiol. 17(1):91-104. [PudMed:24803113] experimental in_silico
(2) Chain PS; Denef VJ; Konstantinidis KT; Vergez LM; Agullo L; Reyes VL; Hauser L; Cordova M; Gomez L; Gonzalez M; Land M; Lao V; Larimer F; LiPuma JJ; Mahenthiralingam E; Malfatti SA; Marx CJ; Parnell JJ; Ramette A; Richardson P; Seeger M; Smith D; Spilker T; Sul WJ; Tsoi TV; Ulrich LE; Zhulin IB; Tiedje JM (2006). Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility. Proc Natl Acad Sci U S A. 103(42):15280-7. [PudMed:17030797] in_silico
 
experimental experimental literature
in_silico in silico analysis literature