ICEberg
I. Information of ICE
ICEberg ID96
Name Tn5276 This ICE is derived from experimental literature
FamilyUnclassified
OrganismLactococcus lactis R5
Size (bp)~70 kb
GC content [Genome] (%)-
Insertion site-
FunctionNisin production and sucrose fermentation
Species that ICE can be transferred toLactococcus lactis
Nucleotide SequenceL27649; M84769; M84770 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of Tn5276 is not available.



The graph information of Tn5276 components from L27649
Incomplete gene list of Tn5276 from L27649
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1-1..346 [+], 346-
2xis401..607 [+], 207excisionase
3int690..1829 [+], 1140integraseIntegrase 
 
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) De Vos WM; Beerthuyzen MM; Luesink EL; Kuipers OP (1995). Genetics of the nisin operon and the sucrose-nisin conjugative transposon Tn5276. Dev Biol Stand. 85:617-25. [PudMed:8586240] experimental
(2) Rauch PJ; de Vos WM (1994). Identification and characterization of genes involved in excision of the Lactococcus lactis conjugative transposon Tn5276. J Bacteriol. 176(8):2165-71. [PudMed:8157585] experimental
(3) Rauch PJ; De Vos WM (1992). Characterization of the novel nisin-sucrose conjugative transposon Tn5276 and its insertion in Lactococcus lactis. J Bacteriol. 174(4):1280-7. [PudMed:1310502] experimental
 
experimental experimental literature