ICEberg
I. Information of ICE
ICEberg ID860
Name Tn6194 [CTnCD11] This ICE is derived from experimental literature
FamilyTn916
OrganismClostridium difficile 2007855
Size (bp)-
GC content [Genome] (%)-
Insertion site-
FunctionAntibiotic resistance genes: erm(B)
Species that ICE can be transferred to-
Nucleotide SequenceFN665654 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of Tn6194 [CTnCD11] is not available.

 

The gene information of Tn6194 [CTnCD11] is not available.
ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins0Fasta
(1) Wasels F; Monot M; Spigaglia P; Barbanti F; Ma L; Bouchier C; Dupuy B; Mastrantonio P (2014). Inter- and intraspecies transfer of a Clostridium difficile conjugative transposon conferring resistance to MLSB. Microb Drug Resist. 20(6):555-60. [PudMed:25055190]
(2) Wasels F; Spigaglia P; Barbanti F; Mastrantonio P (2013). Clostridium difficile erm(B)-containing elements and the burden on the in vitro fitness. J Med Microbiol. 62(Pt 9):1461-7. [PudMed:23741023]
(3) He M; Miyajima F; Roberts P; Ellison L; Pickard DJ; Martin MJ; Connor TR; Harris SR; Fairley D; Bamford KB; D'Arc S; Brazier J; Brown D; Coia JE; Douce G; Gerding D; Kim HJ; Koh TH; Kato H; Senoh M; Louie T; Michell S; Butt E; Peacock SJ; Brown NM; Riley T; Songer G; Wilcox M; Pirmohamed M; Kuijper E; Hawkey P; Wren BW; Dougan G; Parkhill J; Lawley TD (2013). Emergence and global spread of epidemic healthcare-associated Clostridium difficile. Nat Genet. 45(1):109-13. [PudMed:23222960]
(4) He M; Sebaihia M; Lawley TD; Stabler RA; Dawson LF; Martin MJ; Holt KE; Seth-Smith HM; Quail MA; Rance R; Brooks K; Churcher C; Harris D; Bentley SD; Burrows C; Clark L; Corton C; Murray V; Rose G; Thurston S; van Tonder A; Walker D; Wren BW; Dougan G; Parkhill J (2010). Evolutionary dynamics of Clostridium difficile over short and long time scales. Proc Natl Acad Sci U S A. 107(16):7527-32. [PudMed:20368420]