ICEberg
I. Information of ICE
ICEberg ID837
Name ICESsuNC28 This ICE is derived from experimental literature
FamilyUnclassified
OrganismStreptococcus suis nc286A7
Size (bp)29661
GC content [Genome] (%)34.14
Insertion site-
Functionspw_like-sat4-lnu(B)-lsa(E) multidrug resistance cluster; cadmium resistance operon
Species that ICE can be transferred to-
Nucleotide SequenceKU215704 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..29661 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICESsuNC28 is not available.



The graph information of ICESsuNC28 components from KU215704
Complete gene list of ICESsuNC28 from KU215704
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1ICESsuNC28_00001270..1322 [-], 1053hypothetical protein
2ICESsuNC28_000021316..2782 [-], 1467hypothetical protein
3ICESsuNC28_000033144..4547 [-], 1404hypothetical protein
4ICESsuNC28_000044637..5215 [-], 579hypothetical protein
5ICESsuNC28_000055224..6195 [-], 972hypothetical protein
6ICESsuNC28_000066302..10702 [-], 4401hypothetical protein
7ICESsuNC28_0000710706..11437 [-], 732hypothetical protein
8cadC12062..12430 [-], 369CadC
9ICESsuNC28_0000912412..13038 [-], 627hypothetical protein
10spw-like13872..14660 [-], 789Spw-like protein
11apt14792..15319 [-], 528Apt
12aadE15363..16226 [-], 864AadE
13ycgJ16259..16993 [-], 735YcgJ
14ICESsuNC28_0001416974..17564 [-], 591hypothetical protein
15lnu(B)17882..18685 [-], 804Lnu(B)AR 
16lsa(E)18739..20223 [-], 1485Lsa(E)
17ICESsuNC28_0001720750..20935 [-], 186hypothetical protein
18pknB21632..22465 [-], 834PknB
19czcD22540..23430 [-], 891CzcD
20bmrR23531..24301 [+], 771BmrR
21ICESsuNC28_0002124556..24816 [-], 261hypothetical protein
22ICESsuNC28_0002225453..25809 [-], 357hypothetical protein
23ICESsuNC28_0002325809..26171 [-], 363hypothetical protein
24ICESsuNC28_0002426164..26454 [-], 291hypothetical protein
25ICESsuNC28_0002526469..27293 [-], 825hypothetical protein
26ICESsuNC28_0002627302..27586 [-], 285hypothetical protein
27ICESsuNC28_0002727739..28257 [+], 519hypothetical protein
28Int-Tn28305..29474 [+], 1170Int-TnIntegrase 
 
integrase Gene may contribute to site-specific recombination
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins28Fasta
(1) Huang K; Zhang Q; Song Y; Zhang Z; Zhang A; Xiao J; Jin M (2016). Characterization of Spectinomycin Resistance in Streptococcus suis Leads to Two Novel Insights into Drug Resistance Formation and Dissemination Mechanism. Antimicrob Agents Chemother. 60(10):6390-2. [PudMed:27458226]