ICEberg
I. Information of ICE
ICEberg ID792
Name ICESag37741 This is a predicted ICE derived from literature
FamilyUnclassified
OrganismStreptococcus agalactiae CCUG 37741
Size (bp)115543
GC content [Genome] (%)35.55
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceALQQ01000033 (complete ICE sequence in this contig)
Replicon-
Coordinates3936..119478 
Putative oriT region -
Putative relaxase coordinates: 59470..60801; Locus tag: SAG0064_01145;  Family:  MOBP


II. ICE interaction with IME/CIME/

The interaction information of ICESag37741 is not available.



The graph information of ICESag37741 components from ALQQ01000033
Complete gene list of ICESag37741 from ALQQ01000033
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SAG0064_00825290..2104 [-], 1815DNA polymerase III subunit epsilon
2SAG0064_008302521..3741 [+], 1221hypothetical protein
3SAG0064_008353936..5135 [-], 1200integrase
4SAG0064_008405158..5385 [-], 228hypothetical protein
5SAG0064_008455664..5888 [-], 225Cro/Cl family transcriptional regulator
6SAG0064_008506069..7934 [-], 1866Tn5252, relaxase
7SAG0064_008557921..8286 [-], 366hypothetical protein
8SAG0064_008608293..8655 [-], 363hypothetical protein
9SAG0064_008658979..9086 [+], 108hypothetical protein
10SAG0064_008709147..9629 [+], 483hypothetical protein
11SAG0064_008759626..9811 [+], 186transposase
12SAG0064_0088010086..12215 [-], 2130cadmium transporter
13SAG0064_0088512208..12576 [-], 369ArsR family transcriptional regulator
14SAG0064_0089012779..13078 [+], 300hypothetical protein
15SAG0064_0089513132..13920 [-], 789hypothetical protein
16SAG0064_0090013929..14525 [+], 597membrane protein
17SAG0064_0090514699..16786 [-], 2088ATPase
18SAG0064_0091016925..17131 [-], 207carbonate dehydratase
19SAG0064_0091517279..17755 [-], 477copper-exporting ATPase
20SAG0064_0092017742..18188 [-], 447uracil phosphoribosyltransferase
21SAG0064_0092518646..18984 [-], 339ArsR family transcriptional regulator
22SAG0064_0093018997..19611 [-], 615cadmium transporter
23SAG0064_0093519685..21247 [-], 1563recombinase
24SAG0064_0094021247..22080 [-], 834recombinase
25SAG0064_0094522274..22435 [-], 162lysozyme
26SAG0064_0095022544..24013 [-], 1470peptidoglycan-binding protein LysM
27SAG0064_0095524020..24415 [-], 396hypothetical protein
28SAG0064_0096024393..24599 [-], 207hypothetical protein
29SAG0064_0096525038..25130 [+], 93hypothetical protein
30SAG0064_0097025236..25595 [+], 360ArsR family transcriptional regulator
31SAG0064_0097525592..27709 [+], 2118cadmium transporter
32SAG0064_0098028412..28642 [+], 231amidaseYddH, T4SS component 
33SAG0064_0098528755..29525 [-], 771membrane protein
34SAG0064_0099029518..30453 [-], 936multidrug ABC transporter ATP-binding protein
35SAG0064_0099530608..30718 [-], 111hypothetical protein
36SAG0064_0100030743..32416 [-], 1674dehydrogenase
37SAG0064_0100532437..32649 [-], 213hypothetical protein
38SAG0064_0101032704..34446 [-], 1743arsenic transporter ATPase
39SAG0064_0101534482..34829 [-], 348ArsR family transcriptional regulator
40SAG0064_0102034963..35334 [-], 372arsenical resistance operon trans-acting repressor ArsD
41SAG0064_0102535336..35629 [-], 294arsenical resistance operon repressor
42SAG0064_0103035811..36452 [-], 642transposase IS1216
43SAG0064_0103536777..37073 [-], 297ATPase
44SAG0064_0104037123..37512 [-], 390chemotaxis protein
45SAG0064_0104537509..37736 [-], 228hypothetical protein
46SAG0064_0105037790..38866 [-], 1077DNA primase
47SAG0064_0105538906..39544 [-], 639peptidylprolyl isomerase
48SAG0064_0106039640..39930 [-], 291membrane protein
49SAG0064_0106539944..40243 [-], 300hypothetical protein
50SAG0064_0107040314..44981 [-], 4668helicase
51SAG0064_0107545090..46583 [-], 1494recombinase
52SAG0064_0108046576..48243 [-], 1668recombinase
53SAG0064_0108548243..49907 [-], 1665recombinaseIntegrase 
54SAG0064_0109050006..50161 [-], 156hypothetical protein
55SAG0064_0109550614..50922 [-], 309hypothetical protein
56SAG0064_0110050974..51099 [-], 126hypothetical protein
57SAG0064_0110551281..51865 [-], 585hypothetical protein
58SAG0064_0111051876..52577 [-], 702cobalt transporter
59cbiO52582..54087 [-], 1506cobalt ABC transporter ATP-binding protein
60SAG0064_0112054090..55799 [-], 1710ABC transporter
61SAG0064_0112555792..57531 [-], 1740ABC transporter ATP-binding protein
62SAG0064_0113057672..58190 [-], 519hypothetical protein
63SAG0064_0113558241..58813 [-], 573TetR family transcriptional regulator
64SAG0064_0114059110..59469 [+], 360conjugal transfer protein
65SAG0064_0114559470..60801 [+], 1332endonucleaseRelaxase, MOBP Family
66SAG0064_0115060836..61642 [-], 807conjugative transposon protein
67SAG0064_0115561632..62093 [-], 462conjugative transposon protein
68SAG0064_0116062121..63188 [-], 1068conjugative transposon protein
69SAG0064_0116563185..64861 [-], 1677DNA recombinase
70SAG0064_0117064932..66134 [-], 1203hypothetical protein
71SAG0064_0117566150..67871 [-], 1722hypothetical protein
72SAG0064_0118067885..69108 [-], 1224DNA methyltransferase
73SAG0064_0118569127..70188 [-], 1062DNA methyltransferase
74SAG0064_0119070181..70411 [-], 231transcriptional regulator
75SAG0064_0119570560..71219 [-], 660DNA-binding protein
76SAG0064_0120071274..79622 [-], 8349DNA helicase
77SAG0064_0120579632..80621 [-], 990DNA-methyltransferase
78SAG0064_0121080645..82351 [-], 1707DNA topoisomerase
79SAG0064_0121582445..84661 [-], 2217cell surface protein
80SAG0064_0122084642..84878 [-], 237conjugative transposon protein
81SAG0064_0122584891..87185 [-], 2295cell wall hydrolase
82SAG0064_0123087192..89624 [-], 2433conjugal transfer protein TraE
83SAG0064_0123589527..89925 [-], 399conjugal transfer protein
84SAG0064_0124089929..90195 [-], 267hypothetical protein
85SAG0064_0124590208..91071 [-], 864membrane protein
86SAG0064_0125091084..91299 [-], 216conjugative transfer protein
87SAG0064_0125591303..91614 [-], 312single-stranded DNA-binding protein
88SAG0064_0126091944..92114 [-], 171hypothetical protein
89SAG0064_0126592192..93973 [-], 1782conjugal transfer protein TraGT4CP 
90SAG0064_0127093970..94455 [-], 486conjugal transfer protein
91SAG0064_0127594455..95492 [-], 1038conjugal transfer protein
92SAG0064_0128095568..95849 [-], 282membrane protein
93SAG0064_0128595861..96709 [-], 849DNA-binding protein
94SAG0064_0129096769..99012 [-], 2244hypothetical protein
95SAG0064_0129599061..99612 [-], 552hypothetical protein
96SAG0064_0130099596..99787 [-], 192calcium-binding protein
97SAG0064_0130599788..104683 [-], 4896glucan-binding proteinPrgB, T4SS component 
98SAG0064_01310104962..105552 [+], 591abortive phage infection protein
99SAG0064_01315105549..106394 [+], 846abortive phage infection protein
100SAG0064_01320106480..109281 [-], 2802amidasePrgK, T4SS component 
101SAG0064_01325109283..111634 [-], 2352ATPase AAAPrgJ, T4SS component 
102SAG0064_01330111591..111944 [-], 354prgI family protein
103SAG0064_01335112006..112860 [-], 855conjugal transfer protein TrbL
104SAG0064_01340112879..113121 [-], 243membrane protein
105SAG0064_01345113139..114956 [-], 1818conjugal transfer protein TraG
106SAG0064_01350114956..115444 [-], 489hypothetical protein
107SAG0064_01355115521..116105 [-], 585CAAX amino terminal protease
108SAG0064_01360116108..116341 [-], 234hypothetical protein
109SAG0064_01365116350..116733 [-], 384arsC family protein
110SAG0064_01370116744..117172 [-], 429hypothetical protein
111SAG0064_01375117156..118511 [-], 1356DNA methylase
112SAG0064_01380118563..118658 [-], 96hypothetical protein
113SAG0064_01385118660..119478 [-], 819replication initiator protein A protein
114SAG0064_01390119475..119648 [-], 174hypothetical protein
115rplL119847..120212 [-], 36650S ribosomal protein L7/L12
116SAG0064_01400120276..120776 [-], 50150S ribosomal protein L10
117mmuM123410..124354 [-], 945homocysteine methyltransferase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins111Fasta
(1) Mingoia M; Morici E; Marini E; Brenciani A; Giovanetti E; Varaldo PE (2016). Macrolide resistance gene erm(TR) and erm(TR)-carrying genetic elements in Streptococcus agalactiae: characterization of ICESagTR7, a new composite element containing IMESp2907. J Antimicrob Chemother. 71(3):593-600. [PudMed:26679245] experimental
 
experimental experimental literature