ICEberg
I. Information of ICE
ICEberg ID775
Name ICEH-2(168) This is a predicted ICE derived from literature
FamilyUnclassified
OrganismMycoplasma fermentans JER
Size (bp)22899
GC content [Genome] (%)25.53
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNC_017509 (complete ICE sequence in this genome)
Replicon-
Genome coordinates254323..277221 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEH-2(168) is not available.



The graph information of ICEH-2(168) components from NC_017509
Complete gene list of ICEH-2(168) from NC_017509
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1MHP168_RS01165250635..253313 [+], 2679hypothetical protein
2MHP168_RS01175254378..255190 [+], 813hypothetical protein
3MHP168_RS01180255231..255983 [+], 753hypothetical protein
4MHP168_RS01185256001..256243 [+], 243hypothetical protein
5MHP168_RS01190256247..257680 [+], 1434hypothetical protein
6MHP168_RS01195257688..260045 [+], 2358integrase
7MHP168_RS01200260320..261063 [+], 744hypothetical protein
8MHP168_RS01205261078..261911 [+], 834hypothetical protein
9MHP168_RS01210261915..262466 [+], 552single-stranded DNA-binding protein
10MHP168_RS01215262579..263568 [+], 990hypothetical protein
11MHP168_RS01220263716..263904 [+], 189hypothetical protein
12MHP168_RS01225263981..264190 [+], 210hypothetical protein
13MHP168_RS01230264171..265739 [+], 1569hypothetical protein
14MHP168_RS03720265786..266052 [+], 267hypothetical protein
15MHP168_RS01235265956..266312 [+], 357hypothetical protein
16MHP168_RS01240266318..268147 [+], 1830hypothetical protein
17MHP168_RS01245268125..270779 [+], 2655DUF87 domain-containing proteinT4CP 
18MHP168_RS01250270772..271356 [+], 585hypothetical protein
19MHP168_RS01255273660..275042 [+], 1383hypothetical protein
20MHP168_RS01260275201..275416 [-], 216hypothetical protein
21MHP168_RS01265275492..276733 [+], 1242hypothetical proteinIntegrase 
22MHP168_RS03725277124..277411 [-], 288hypothetical protein
23MHP168_RS01270277583..277990 [+], 408hypothetical protein
24MHP168_RS01275278028..280190 [-], 2163class 1b ribonucleoside-diphosphate reductase subunit alpha
25MHP168_RS01280280245..280697 [-], 453class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI
26MHP168_RS01285280699..281760 [-], 1062class 1b ribonucleoside-diphosphate reductase subunit beta
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
(1) Guerillot R; Siguier P; Gourbeyre E; Chandler M; Glaser P (2014). The diversity of prokaryotic DDE transposases of the mutator superfamily, insertion specificity, and association with conjugation machineries. Genome Biol Evol. 6(2):260-72. [PudMed:24418649] in_silico
 
in_silico in silico analysis literature