ICEberg
I. Information of ICE
ICEberg ID767
Name ICEBp7061 This is a predicted ICE derived from literature
FamilyICEBs1
OrganismBacillus pumilus ATCC7061
Size (bp)41295
GC content [Genome] (%)38.04
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNZ_ABRX01000006 (complete ICE sequence in this genome)
Replicon-
Genome coordinates41307..82601 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEBp7061 is not available.



The graph information of ICEBp7061 components from NZ_ABRX01000006
Complete gene list of ICEBp7061 from NZ_ABRX01000006
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1BAT_RS1462037061..37294 [+], 234DUF2536 family protein
2BAT_RS1462537331..37996 [-], 666DUF1510 family protein
3BAT_RS1463038064..39806 [-], 1743penicillin-binding protein 2
4BAT_RS1463539857..40330 [-], 474transcription elongation factor GreA
5BAT_RS1464041307..41966 [+], 660hypothetical protein
6BAT_RS1464542099..42932 [+], 834hypothetical protein
7BAT_RS1465043003..43194 [+], 192hypothetical protein
8BAT_RS1465543368..43835 [-], 468hypothetical protein
9BAT_RS1466043997..44818 [-], 822N-acetylmuramoyl-L-alanine amidase
10BAT_RS1466544865..45284 [-], 420holin
11BAT_RS1467045329..45508 [-], 180XkdX family protein
12BAT_RS1467545505..45789 [-], 285hypothetical protein
13BAT_RS1468045804..47465 [-], 1662phage baseplate upper protein
14BAT_RS1468547478..50033 [-], 2556peptidase G2
15BAT_RS1469050072..51829 [-], 1758alkaline phosphataseTcpG, T4SS component 
16BAT_RS1469551841..52677 [-], 837phage tail family protein
17BAT_RS1470052678..57111 [-], 4434phage tail tape measure protein
18BAT_RS1470557318..57662 [-], 345hypothetical protein
19BAT_RS1471057719..58333 [-], 615tail protein
20BAT_RS1471558336..58734 [-], 399DUF3168 domain-containing protein
21BAT_RS1472058731..59135 [-], 405phage protein, HK97 gp10 family
22BAT_RS1472559135..59455 [-], 321head-tail adaptor protein
23BAT_RS1473059445..59747 [-], 303phage gp6-like head-tail connector protein
24BAT_RS1473559760..60167 [-], 408collagen-like protein
25BAT_RS1474060191..61486 [-], 1296phage major capsid protein
26BAT_RS1474561526..62149 [-], 624HK97 family phage prohead protease
27BAT_RS1475062112..63392 [-], 1281phage portal protein
28BAT_RS1475563397..63576 [-], 180hypothetical protein
29BAT_RS1476063576..65267 [-], 1692terminase large subunit
30BAT_RS1476565282..65797 [-], 516phage terminase small subunit P27 family
31BAT_RS1477066025..66390 [-], 366HNH endonuclease
32BAT_RS1477566380..66736 [-], 357hypothetical protein
33BAT_RS1478066795..67418 [-], 624hypothetical protein
34BAT_RS1478567583..67972 [-], 390hypothetical protein
35BAT_RS1479067972..68310 [-], 339hypothetical protein
36BAT_RS1958068519..69331 [-], 813type II toxin-antitoxin system PemK/MazF family toxin
37BAT_RS1480069643..70734 [-], 1092DUF2971 domain-containing protein
38BAT_RS1480570876..71418 [-], 543site-specific integraseIntegrase 
39BAT_RS1481071415..71864 [-], 450DUF1492 domain-containing protein
40BAT_RS1481572092..72697 [-], 606hypothetical protein
41BAT_RS1482072751..73158 [-], 408hypothetical protein
42BAT_RS1482573179..73637 [-], 459hypothetical protein
43BAT_RS1483073658..74641 [-], 984DNA (cytosine-5-)-methyltransferase
44BAT_RS1483574638..74886 [-], 249hypothetical protein
45BAT_RS1484074883..75134 [-], 252hypothetical protein
46BAT_RS1484575168..75377 [-], 210hypothetical protein
47BAT_RS1485075871..76398 [-], 528hypothetical protein
48BAT_RS1485576659..77480 [-], 822ATP-binding protein
49BAT_RS1486077464..78324 [-], 861replication protein
50BAT_RS1486578631..78948 [-], 318hypothetical protein
51BAT_RS1487078989..79192 [-], 204XRE family transcriptional regulator
52BAT_RS1487579368..79766 [+], 399XRE family transcriptional regulator
53BAT_RS1488080110..81207 [-], 1098hypothetical protein
54BAT_RS1489082672..83298 [-], 627uridine kinase
55BAT_RS1489583306..84574 [-], 1269collagenase-like protease
56BAT_RS1490084595..85524 [-], 930U32 family peptidase
57BAT_RS1490585521..86186 [-], 666O-methyltransferase
58BAT_RS1491086397..87479 [-], 1083endolytic transglycosylase MltG
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins49Fasta
(1) Tirumalai MR; Fox GE (2013). An ICEBs1-like element may be associated with the extreme radiation and desiccation resistance of Bacillus pumilus SAFR-032 spores. Extremophiles. 17(5):767-74. [PudMed:23812891] in_silico
 
in_silico in silico analysis literature