ICEberg
I. Information of ICE
ICEberg ID766
Name ICEA-IV(5632) This is a predicted ICE derived from literature
FamilyUnclassified
OrganismMycoplasma agalactiae 5632
Size (bp)7477
GC content [Genome] (%)26.44
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNC_013948 (complete ICE sequence in this genome)
Replicon-
Genome coordinates458522..465998 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEA-IV(5632) is not available.



The graph information of ICEA-IV(5632) components from NC_013948
Complete gene list of ICEA-IV(5632) from NC_013948
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1MAGA_RS01970453582..454610 [+], 1029IS30 family transposase
2MAGA_RS01975454715..455431 [+], 717Eco47II family restriction endonuclease
3MAGA_RS01980455817..456851 [+], 1035hypothetical protein
4MAGA_RS01985457411..457995 [+], 585hypothetical protein
5MAGA_RS01990459125..460357 [-], 1233hypothetical proteinIntegrase 
6MAGA_RS01995460527..461165 [-], 639hypothetical protein
7MAGA_RS02000462019..463047 [-], 1029IS30 family transposase
8MAGA_RS02010464373..465731 [-], 1359hypothetical protein
9MAGA_RS04425466296..466523 [+], 228hypothetical protein
10MAGA_RS02015466964..467470 [-], 507hypothetical protein
11MAGA_RS02020467660..468385 [-], 726glycerol-3-phosphate acyltransferase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins4Fasta
(1) Guerillot R; Siguier P; Gourbeyre E; Chandler M; Glaser P (2014). The diversity of prokaryotic DDE transposases of the mutator superfamily, insertion specificity, and association with conjugation machineries. Genome Biol Evol. 6(2):260-72. [PudMed:24418649] in_silico
 
in_silico in silico analysis literature