ICEberg
I. Information of ICE
ICEberg ID76
Name ICESde3396 This ICE is derived from experimental literature
FamilyICESa2603
OrganismStreptococcus dysgalactiae subsp. equisimilis NS3396
Size (bp)63668
GC content [Genome] (%)38.14
Insertion site-
FunctionCadmium resistance; arsenic resistance
Species that ICE can be transferred to-Hemolytic Streptococci
Nucleotide SequenceEU142041 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..63668 
Putative oriT region -
Putative relaxase coordinates: 2134..3999; Locus tag: ICESde3396_04;  Family:  MOBP


II. ICE interaction with IME/CIME/

The interaction information of ICESde3396 is not available.



The graph information of ICESde3396 components from EU142041
Complete gene list of ICESde3396 from EU142041
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1ICESde3396_011..1212 [-], 1212site-specific recombinase
2ICESde3396_021223..1450 [-], 228hypothetical protein
3ICESde3396_031729..1953 [-], 225transcriptional regulator, Cro/CI family protein
4ICESde3396_042134..3999 [-], 1866relaxaseRelaxase, MOBP Family
5mobC3986..4351 [-], 366bacterial mobilization protein
6ICESde3396_064358..4720 [-], 363hypothetical protein
7ICESde3396_075043..5150 [+], 108hypothetical protein
8ICESde3396_085211..5693 [+], 483hypothetical protein
9ICESde3396_095534..5875 [+], 342transposase/integrase
10cadA16150..8279 [-], 2130probable cadmium efflux ATPase CadA
11cadC18272..8640 [-], 369cadmium efflux system accessory protein CadC
12ICESde3396_128843..9142 [+], 300hypothetical protein
13ICESde3396_139196..9984 [-], 789hypothetical protein
14ICESde3396_149990..10589 [+], 600putative membrane spanning protein
15tcrB10763..12850 [-], 2088probable copper exporting ATPase TcrB-like protein
16tcrZ12989..13195 [-], 207copper-transporting ATPase TcrZ-like protein
17tcrA13343..13819 [-], 477copper-transporting ATPase TcrA-like protein
18tcrY13806..14252 [-], 447transcriptional repressor TcrY-like protein
19ICESde3396_1914460..14552 [+], 93hypothetical protein
20cadC214710..15048 [-], 339cadmium efflux system accessory protein CadC
21cadD15061..15717 [-], 657cadmium resistance protein CadD
22ICESde3396_2215749..17311 [-], 1563site-specific recombinaseIntegrase 
23ICESde3396_2317311..18222 [-], 912site-specific recombinase
24ICESde3396_2418338..18499 [-], 162phage lysin
25ICESde3396_2518608..20077 [-], 1470amidase/ phage cell wall hydrolase
26ICESde3396_2620084..20479 [-], 396holin
27ICESde3396_2720457..20663 [-], 207hypothetical protein
28cadC321300..21659 [+], 360cadmium efflux system accessory protein CadC
29cadA221656..23773 [+], 2118cadmium efflux ATPase CadA
30ICESde3396_3024476..24706 [+], 231hypothetical proteinYddH, T4SS component 
31ICESde3396_3124819..25589 [-], 771inner membrane transport permease YadH-like protein
32ICESde3396_3225582..26517 [-], 936ABC transporter ATP-subunit YadG-like protein
33ICESde3396_3326672..26782 [-], 111hypothetical protein
34lpdA26807..28480 [-], 1674coenzyme A disulfide reductase LpdA
35yqcL28501..28713 [-], 213arsenical resistance protein
36arsA28768..30510 [-], 1743arsenical pump-driving ATPase ArsA
37arsR130546..30893 [-], 348arsenical resistance repressor ArsR
38arsD31027..31398 [-], 372arsenical resistance trans-acting repressor ArsD
39arsR231400..31666 [-], 267arsenical resistance repressor ArsR
40ICESde3396_4031875..32558 [-], 684transposase
41ICESde3396_4132841..33200 [-], 360hypothetical protein
42ICESde3396_4233187..33576 [-], 390hypothetical protein
43ICESde3396_4333573..33800 [-], 228hypothetical protein
44ICESde3396_4433854..34930 [-], 1077putative zinc finger protein
45ICESde3396_4534970..35608 [-], 639hypothetical protein
46ICESde3396_4635704..35994 [-], 291hypothetical protein
47ICESde3396_4736008..36307 [-], 300hypothetical protein
48ICESde3396_4836378..43214 [-], 6837SNF2-related helicase
49ICESde3396_4943251..43802 [-], 552hypothetical protein
50ICESde3396_5043786..43977 [-], 192calcium-binding protein
51ICESde3396_5243978..48873 [-], 4896agglutinin receptor precursorPrgB, T4SS component 
52ICESde3396_5146772..46882 [+], 111hypothetical protein
53ICESde3396_5349140..49742 [+], 603abortive Infection Protein AbiGI
54ICESde3396_5449739..50584 [+], 846abortive infection protein AbiGII
55ICESde3396_5550670..53471 [-], 2802N-acetylmuramoyl-L-alanine amidasePrgK, T4SS component 
56ICESde3396_5653473..55824 [-], 2352hypothetical proteinPrgJ, T4SS component 
57ICESde3396_5756196..57050 [-], 855hypothetical protein
58ICESde3396_5857069..57323 [-], 255hypothetical protein
59traG57329..59146 [-], 1818conjugal transfer protein TraGT4CP 
60ICESde3396_6059146..59670 [-], 525hypothetical protein
61ICESde3396_6159711..60301 [-], 591putative protease
62ICESde3396_6260298..60537 [-], 240hypothetical protein
63ICESde3396_6360540..60929 [-], 390hypothetical protein
64ICESde3396_6460934..61362 [-], 429hypothetical protein
65ICESde3396_6561346..62701 [-], 1356DNA methylase
66ICESde3396_6662850..63668 [-], 819replication initiator
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins66Fasta
(1) Davies MR; Shera J; Van Domselaar GH; Sriprakash KS; McMillan DJ (2009). A novel integrative conjugative element mediates genetic transfer from group G Streptococcus to other {beta}-hemolytic Streptococci. J Bacteriol. 191(7):2257-65. [PudMed:19168609] experimental
 
experimental experimental literature