ICEberg
I. Information of ICE
ICEberg ID58
Name ICEBfrYCH46-1 This is a putative ICE identified in this study by Blast
FamilyCTnDOT/ERL
OrganismBacteroides fragilis YCH46
Size (bp)49170
GC content [Genome] (%)50.26[43.27]
Insertion siteGTAACTTTGC
FunctionTetracycline resistance
Species that ICE can be transferred toBacteroides fragilis
Nucleotide SequenceAP006841 (complete ICE sequence in this genome)
Replicon chromosome (5277274 bp, BioProject:13067) [NC_006347]
Genome coordinates114653..163822 
Putative oriT region -
Putative relaxase coordinates: 134199..135446; Locus tag: BF0132;  Family:  MOBP


II. ICE interaction with IME/CIME/

The interaction information of ICEBfrYCH46-1 is not available.



The graph information of ICEBfrYCH46-1 components from AP006841
Complete gene list of ICEBfrYCH46-1 from AP006841
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1BF0100110201..112078 [-], 1878glucose-inhibited division protein A
2BF0101112576..112800 [-], 225hypothetical protein
3BF0102112815..114503 [+], 1689conserved hypothetical protein
4BF0103114772..114993 [-], 222hypothetical protein
5BF0104115091..115501 [+], 411hypothetical protein
6BF0105115716..116111 [+], 396conserved hypothetical protein
7BF0106116125..116541 [+], 417hypothetical protein
8BF0107116538..117869 [+], 1332hypothetical protein
9BF0108117894..118151 [+], 258conserved hypothetical protein
10BF0109118320..118646 [+], 327hypothetical protein
11BF0110118589..119008 [+], 420hypothetical protein
12BF0111119042..119287 [-], 246hypothetical protein
13BF0112119496..120020 [-], 525probable lysozyme
14BF0113120020..120523 [-], 504TraQ
15BF0114120520..121422 [-], 903TraP
16BF0115121430..122005 [-], 576TraO
17BF0116122008..122994 [-], 987TraN
18BF0117123029..124381 [-], 1353TraM
19BF0118124362..124670 [-], 309TraL
20BF0119124677..125300 [-], 624TraK
21BF0120125332..126336 [-], 1005TraJ
22BF0121126340..126969 [-], 630TraIVirB5, T4SS component 
23BF0122126993..127373 [-], 381TraH
24BF0123127414..129918 [-], 2505TraG
25BF0124129915..130247 [-], 333TraF
26BF0125130258..130575 [-], 318TraE
27BF0126130777..131487 [-], 711TraD
28BF0127131522..131875 [-], 354TraB
29BF0128131878..132318 [-], 441conserved protein found in conjugate transposon
30BF0129132321..133370 [-], 1050TraA
31BF0130133355..133522 [+], 168hypothetical protein
32BF0131133792..134220 [+], 429conserved hypothetical protein
33BF0132134199..135446 [+], 1248conserved hypothetical proteinRelaxase, MOBP Family
34BF0133135477..137495 [+], 2019putative mobilization proteinT4CP 
35BF0134137627..140881 [-], 3255hypothetical protein
36BF0135140898..142028 [-], 1131conserved hypothetical protein
37BF0136142330..142935 [-], 606tetracycline resistance element mobilization regulatory protein RteC
38BF0137143174..143596 [-], 423hypothetical protein
39BF0138143876..145198 [-], 1323rteB gene product
40BF0139145191..146039 [-], 849truncated tetracycline resistance element regulator RteA
41BF0140146009..147508 [-], 1500truncated tetracycline resistance element regulator RteA
42BF0141147508..149481 [-], 1974tetracycline resistant protein TetQ
43BF0142150091..155907 [-], 5817putative DNA methylase
44BF0143155897..156484 [-], 588conserved hypothetical protein
45BF0144156512..158599 [-], 2088Exc protein
46BF0145158660..160231 [-], 1572conserved hypothetical protein
47BF0146160252..160602 [-], 351conserved hypothetical protein
48BF0147160606..161031 [-], 426conserved hypothetical protein
49BF0148160967..161164 [+], 198conserved hypothetical protein
50BF0149161128..161469 [+], 342conserved hypothetical protein
51BF0150161501..161806 [+], 306conserved hypothetical protein
52BF0151161884..162246 [-], 363conserved hypothetical protein
53BF0152162258..163493 [-], 1236tyrosine type site-specific recombinaseIntegrase 
54BF0153163848..164198 [+], 351hypothetical protein
55BF0154164234..165457 [+], 1224putative pyrogenic exotoxin B
56BF0155165475..165855 [+], 381conserved hypothetical protein
57BF0156166147..166566 [-], 420conserved hypothetical protein
58BF0157166871..167053 [+], 183hypothetical protein
59BF0158167016..167441 [+], 426hypothetical protein
60BF0159167606..168487 [+], 882conserved hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins50Fasta
Identified as part of this study from AP006841