ICEberg
I. Information of ICE
ICEberg ID54
Name ICETauDSM9187-1 This is a putative ICE identified in this study by Blast
FamilyICEclc
OrganismTolumonas auensis DSM 9187
Size (bp)97027
GC content [Genome] (%)62.47[49.03]
Insertion sitetRNA-Gly(Tola_R0078)
Functionbeta-lactamase
Species that ICE can be transferred to-
Nucleotide SequenceCP001616 (complete ICE sequence in this genome)
Replicon chromosome (3471292 bp, BioProject:33873) [NC_012691]
Genome coordinates2621845..2718871 
Putative oriT region -
Putative relaxase coordinates: 2677917..2679773; Locus tag: Tola_2455;  Family:  MOBH


II. ICE interaction with IME/CIME/

The interaction information of ICETauDSM9187-1 is not available.



The graph information of ICETauDSM9187-1 components from CP001616
Complete gene list of ICETauDSM9187-1 from CP001616
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1Tola_23912618162..2619289 [+], 1128iron-sulfur cluster binding protein
2Tola_23922619299..2620042 [+], 744ROK family protein
3Tola_23932620089..2620994 [-], 906band 7 protein
4Tola_23942621845..2622597 [+], 753conserved hypothetical protein
5Tola_23952622716..2622955 [+], 240phage transcriptional regulator, AlpA
6Tola_23962622966..2623829 [+], 864Cobyrinic acid ac-diamide synthase
7Tola_23972623813..2624073 [+], 261conserved hypothetical protein
8Tola_23982624066..2625802 [+], 1737conserved hypothetical protein
9Tola_23992625814..2626374 [+], 561conserved hypothetical protein
10Tola_24002626374..2627579 [+], 1206conserved hypothetical protein
11Tola_24012627938..2628726 [+], 789Domain of unknown function DUF1845
12Tola_24022628723..2629253 [+], 531conserved hypothetical protein
13Tola_24032629327..2629728 [+], 402single-strand binding protein/Primosomal replication protein n
14Tola_24042630003..2632012 [+], 2010DNA topoisomerase III
15Tola_24052632256..2632486 [-], 231hypothetical protein
16Tola_24072632967..2634559 [+], 1593conserved hypothetical protein
17Tola_24082634921..2635484 [+], 564conserved hypothetical protein
18Tola_24102637424..2637636 [+], 213conserved hypothetical protein
19Tola_24112637660..2638052 [+], 393conserved hypothetical protein
20Tola_24122638150..2638611 [+], 462hypothetical protein
21Tola_24132638711..2639373 [+], 663conserved hypothetical protein
22Tola_24142639494..2640237 [+], 744conserved hypothetical protein
23Tola_24152640529..2641341 [+], 813conserved hypothetical protein
24Tola_24162641935..2642849 [+], 915conserved hypothetical protein
25Tola_24172643003..2643830 [+], 828protein of unknown function DUF932
26Tola_24182643929..2644621 [+], 693conserved hypothetical protein
27Tola_24192644711..2645052 [+], 342conserved hypothetical protein
28Tola_24202645136..2645792 [+], 657conserved hypothetical protein
29Tola_24212645859..2646968 [+], 1110conserved hypothetical protein
30Tola_24222647024..2647344 [+], 321conserved hypothetical protein
31Tola_24232647431..2647739 [+], 309conserved hypothetical protein
32Tola_24242647836..2650121 [+], 2286helicase domain protein
33Tola_24252650255..2651031 [+], 777conserved hypothetical protein
34Tola_24262651101..2652915 [-], 1815UvrD/REP helicase
35Tola_24272652902..2654689 [-], 1788conserved hypothetical protein
36Tola_24282654915..2655478 [+], 564conserved hypothetical proteinTfc2, T4SS component 
37Tola_24292655475..2656134 [+], 660conserved hypothetical proteinTfc2, T4SS component 
38Tola_24302656147..2656875 [+], 729putative secreted proteinTfc3, T4SS component 
39Tola_24312656857..2657447 [+], 591Lytic transglycosylase catalyticTfc4, T4SS component 
40Tola_24322657444..2657989 [+], 546putative secreted proteinTfc5, T4SS component 
41Tola_24332657994..2660183 [+], 2190conserved hypothetical proteinTfc6, T4SS component 
42Tola_24342660180..2660929 [+], 750conserved hypothetical proteinTfc8, T4SS component 
43Tola_24352660930..2662300 [-], 1371conserved hypothetical protein
44Tola_24362662464..2662841 [+], 378conserved hypothetical proteinTfc9, T4SS component 
45Tola_24372662838..2663071 [+], 234conserved hypothetical protein
46Tola_24382663088..2663450 [+], 363conserved hypothetical proteinTfc10, T4SS component 
47Tola_24392663461..2663859 [+], 399conserved hypothetical proteinTfc11, T4SS component 
48Tola_24402663856..2664536 [+], 681putative secreted proteinTfc12, T4SS component 
49Tola_24412664533..2665435 [+], 903putative secreted proteinTfc13, T4SS component 
50Tola_24422665425..2666834 [+], 1410putative secreted proteinTfc14, T4SS component 
51Tola_24432666815..2667249 [+], 435putative secreted proteinTfc15, T4SS component 
52Tola_24442667249..2670125 [+], 2877conserved hypothetical proteinTfc16, T4SS component 
53Tola_24452670141..2670899 [+], 759DsbA-thioredoxin family protein
54Tola_24462671071..2671577 [+], 507DNA repair protein RadC
55Tola_24472671713..2672213 [+], 501protein of unknown function DUF1525Tfc24, T4SS component 
56Tola_24482672210..2673142 [+], 933protein of unknown function DUF1527Tfc23, T4SS component 
57Tola_24492673153..2674550 [+], 1398conserved hypothetical proteinTfc22, T4SS component 
58Tola_24502674547..2674897 [+], 351conserved hypothetical protein
59Tola_24512674911..2676431 [+], 1521conserved hypothetical proteinTfc19, T4SS component 
60Tola_24522676442..2676807 [-], 366conserved hypothetical protein
61Tola_24532676835..2677293 [-], 459conserved hypothetical protein
62Tola_24542677293..2677610 [-], 318transcriptional regulator, AbrB family
63Tola_24552677917..2679773 [+], 1857RelaxaseRelaxase, MOBH Family
64Tola_24572680241..2681149 [-], 909carbamate kinase
65Tola_24582681151..2682152 [-], 1002ornithine carbamoyltransferase
66Tola_24592682171..2683400 [-], 1230Arginine deiminase
67Tola_24602683425..2684870 [-], 1446C4-dicarboxylate anaerobic carrier
68Tola_24612685394..2687337 [-], 1944Protein of unknown function DUF676 hydrolase domain protein
69Tola_24622687334..2688377 [-], 1044conserved hypothetical protein
70Tola_24632688377..2689009 [-], 633transcriptional regulator, TetR family
71Tola_24642689453..2690940 [+], 1488RND efflux system, outer membrane lipoprotein, NodT family
72Tola_24652690955..2692034 [+], 1080secretion protein HlyD family protein
73Tola_24662692038..2694806 [+], 2769ABC transporter related
74Tola_24672694808..2695938 [+], 1131ABC-2 type transporter
75Tola_24682695986..2696447 [+], 462conserved hypothetical protein
76Tola_24692696437..2697183 [+], 747acetoacetyl-CoA reductase
77Tola_24702697269..2699773 [+], 2505conserved hypothetical protein
78Tola_24712699770..2701191 [+], 1422Phosphate acetyltransferase
79Tola_24722701235..2701987 [+], 753short-chain dehydrogenase/reductase SDR
80Tola_24732702064..2703305 [+], 1242acetate kinase
81Tola_24742703302..2704507 [+], 1206sodium/glutamate symporter
82Tola_24752704688..2706439 [+], 1752Poly-beta-hydroxybutyrate polymerase domain protein
83Tola_24762706526..2707020 [+], 495UspA domain protein
84Tola_24772707017..2708090 [+], 1074conserved hypothetical protein
85Tola_24782708090..2708221 [+], 132hypothetical protein
86Tola_24792708294..2709190 [+], 897ribose-phosphate pyrophosphokinase
87Tola_24802709229..2711607 [+], 2379D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
88Tola_24812711643..2713001 [+], 1359beta-lactamase domain protein
89Tola_24822712998..2714515 [+], 1518thymidine phosphorylase
90Tola_24832714702..2715592 [+], 891transcriptional regulator, LysR family
91Tola_24842715618..2715911 [-], 294transcriptional regulator, XRE family
92Tola_24852716014..2716655 [+], 642transcriptional regulator, LysR family
93Tola_24862716714..2718645 [-], 1932integrase family proteinIntegrase 
94Tola_24872719255..2719800 [-], 546Exonuclease RNase T and DNA polymerase III
95Tola_24882719878..2720912 [+], 1035ribosome small subunit-dependent GTPase A
96Tola_24892720985..2721860 [+], 876phosphatidylserine decarboxylase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins90Fasta
Identified as part of this study from CP001616