ICEberg
I. Information of ICE
ICEberg ID461
Name ICEShaPor1 This ICE is derived from experimental literature
FamilySXT/R391
OrganismShewanella haliotis AC6
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
Function-
Species that ICE can be transferred toEscherichia coli CAG18420; Escherichia coli BI533
Nucleotide SequenceHE577620 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEShaPor1 is not available.



The graph information of ICEShaPor1 components from HE577620
Incomplete gene list of ICEShaPor1 from HE577620
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1ORF361..52 [+], 52putative conjugation coupling factor
2traL955..1003 [+], 49putative TraL sex pilus assembly and synthesis proteinTraL_F, T4SS component 
3mosA1087..1920 [+], 834putative MosA antitoxin component
4mosT1913..2851 [+], 939putative MosT toxin component
5spa026157..7266 [+], 1110hypothetical protein
6spa037279..8811 [+], 1533hypothetical protein
7spa049126..10259 [+], 1134hypothetical protein
8s05410405..10617 [+], 213hypothetical protein
9traN10628..10813 [+], 186putative TraN pilus assembly and synthesis proteinTraN_F, T4SS component 
10spa0510976..11503 [-], 528hypothetical protein
 
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins10Fasta
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PudMed:22314526] experimental
 
experimental experimental literature