ICEberg
I. Information of ICE
ICEberg ID460
Name ICEValPor1 This ICE is derived from experimental literature
FamilySXT/R391
OrganismVibrio alginolyticus HI5
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionResistance to rifampin
Species that ICE can be transferred toEscherichia coli CAG18420; Escherichia coli BI533
Nucleotide SequenceHE577623 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEValPor1 is not available.



The graph information of ICEValPor1 components from HE577623
Incomplete gene list of ICEValPor1 from HE577623
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1rumB'6665..6934 [-], 270putative DNA repair protein
2ORF367240..7285 [+], 46putative conjugation coupling factor
3ORF377312..7899 [-], 588hypothetical protein
4ORF387913..8152 [-], 240hypothetical protein
5traA8170..8411 [+], 242putative transposaseTraA_F, T4SS component 
6dsbC11962..12084 [+], 123putative DsbC transfer protein
7traN12095..12286 [+], 192putative traN pilus assembly and synthesis proteinTraN_F, T4SS component 
 
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins7Fasta
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PudMed:22314526] experimental
 
experimental experimental literature