ICEberg
I. Information of ICE
ICEberg ID454
Name ICEVspPor2 This ICE is derived from experimental literature
FamilySXT/R391
OrganismVibrio splendidus ZD5
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionResistance to rifampin
Species that ICE can be transferred toEscherichia coli CAG18420; Escherichia coli BI533
Nucleotide SequenceHE577629 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEVspPor2 is not available.



The graph information of ICEVspPor2 components from HE577629
Incomplete gene list of ICEVspPor2 from HE577629
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1ORF364..54 [+], 51putative conjugation coupling factor
2ORF3781..668 [-], 588hypothetical protein
3ORF38682..921 [-], 240hypothetical protein
4mosT2149..3087 [+], 939putative MosT toxin component
5traN4851..5027 [+], 177putative TraN pilus assembly and synthesis proteinTraN_F, T4SS component 
6ORF658430..8601 [-], 172hypothetical protein
 
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins6Fasta
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PudMed:22314526] experimental
 
experimental experimental literature