ICEberg
I. Information of ICE
ICEberg ID452
Name ICEVscSpa3 This ICE is derived from experimental literature
FamilySXT/R391
OrganismVibrio scophthalmi YF7
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
Function-
Species that ICE can be transferred toEscherichia coli CAG18420; Escherichia coli BI533
Nucleotide SequenceHE577627 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEVscSpa3 is not available.



The graph information of ICEVscSpa3 components from HE577627
Incomplete gene list of ICEVscSpa3 from HE577627
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1ORF361..47 [+], 47putative conjugation coupling factor
2ORF3774..588 [-], 515hypothetical protein
3traL950..960 [+], 11putative TraL sex pilus assembly and synthesis protein
 

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins3Fasta
(1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2012). Integrating conjugative elements as vectors of antibiotic, mercury, and quaternary ammonium compound resistance in marine aquaculture environments. Antimicrob Agents Chemother. 56(5):2619-26. [PudMed:22314526] experimental
 
experimental experimental literature