ICEberg
I. Information of ICE
ICEberg ID447
Name ICEValSpa1 This ICE is derived from experimental literature
FamilySXT/R391
OrganismVibrio alginolyticus V86
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionRestriction-modification (RM) systems
Species that ICE can be transferred to-
Nucleotide SequenceHE646882 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEValSpa1 is not available.



The graph information of ICEValSpa1 components from HE646882
Incomplete gene list of ICEValSpa1 from HE646882
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1tnpA1..946 [+], 946putative transposase
2s021414..1082 [-], 669s021 protein
3rumB1289..1597 [-], 309rumB protein
4rumA1566..1880 [-], 315rumA protein
5s0252081..2380 [+], 300s025 protein
6s0262698..3651 [+], 954s026 protein
7icevalSpa1_013732..5558 [+], 1827ICEValSpa1_01 protein
8icevalSpa1_025560..8211 [+], 2652ICEValSpa1_02 protein
9icevalSpa1_038308..12189 [+], 3882hypothetical protein
10icevalSpa1_0412144..14615 [+], 2472hypothetical protein
11icevalSpa1_0514687..15868 [+], 1182hypothetical protein
12-16190..16777 [-], 588hypothetical protein
13-16791..17030 [-], 240hypothetical protein
14s05217131..17448 [+], 318mosA
15tnpA17650..20628 [+], 2979putative transposase
16s05320625..21596 [+], 972mosT
17s05421725..21895 [+], 171s054 protein
18icevalSpa1_0622315..23205 [-], 891hypothetical protein
19icevalSpa1_0723247..24311 [-], 1065hypothetical protein
20icevalSpa1_0824302..24835 [-], 534hypothetical protein
21icevalSpa1_0924816..25196 [-], 381hypothetical protein
22icevalSpa1_1025204..26052 [-], 849hypothetical protein
 

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins22Fasta
(1) Balado M; Lemos ML; Osorio CR (2012). Integrating conjugative elements of the SXT/R391 family from fish-isolated Vibrios encode restriction-modification systems that confer resistance to bacteriophages. FEMS Microbiol Ecol. . [PudMed:22974320] experimental
 
experimental experimental literature