ICEberg
I. Information of ICE
ICEberg ID446
Name ICEVspPor3 This ICE is derived from experimental literature
FamilySXT/R391
OrganismVibrio splendidus V69
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionTetracycline and HgCl2 resistance. Restriction-modification (RM) systems
Species that ICE can be transferred toEscherichia coli CAG18420; Photobacterium damselae subsp. damselae; Edwardsiella tarda; Shewanella putrefaciens; Vibrio anguillarum
Nucleotide SequenceHE646881 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEVspPor3 is not available.



The graph information of ICEVspPor3 components from HE646881
Incomplete gene list of ICEVspPor3 from HE646881
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1tetA98..1252 [-], 1155tetA protein
2tetR1384..1986 [+], 603tetR protein
3tnpB2165..2317 [+], 153tnpB protein
4tnpI2376..2666 [+], 291tnpI protein
5tnpII2798..3529 [+], 732tnpII proteinIntegrase 
6s0213540..4517 [-], 978hypothetical protein
7rumB4724..5032 [-], 309RumB protein
8rumA5001..5450 [-], 450hypothetical protein
9s024'6090..6725 [+], 636s024' protein
10's0246768..6995 [+], 228s024 protein
11s0257209..7508 [+], 300s025 protein
12s0267826..8755 [+], 930s026 protein
13icevspPor3_018752..11640 [+], 2889hypothetical protein
14icevspPor3_0211658..14771 [+], 3114ICEVspPor3_02 protein
15icevspPor3_0314774..18238 [+], 3465ICEVspPor3_03 protein
16-18710..19297 [-], 588hypothetical protein
17-19311..19550 [-], 240hypothetical protein
18s05219653..19967 [+], 315mosA
19s05319960..20898 [+], 939mosT
20s07321562..22269 [+], 708hypothetical protein
21cds122620..23696 [+], 1077hypothetical protein
22merR24350..24739 [+], 390merR protein
23merT24824..25147 [+], 324merT protein
24merP25232..25507 [+], 276merP protein
25merC25517..25930 [+], 414merC protein
26merA25968..27641 [+], 1674merA protein
 
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins26Fasta
(1) Balado M; Lemos ML; Osorio CR (2012). Integrating conjugative elements of the SXT/R391 family from fish-isolated Vibrios encode restriction-modification systems that confer resistance to bacteriophages. FEMS Microbiol Ecol. . [PudMed:22974320] experimental
 
experimental experimental literature