ICEberg
I. Information of ICE
ICEberg ID426
Name Tn5801(B6) This is a predicted ICE derived from literature
FamilyTn5801
OrganismStreptococcus mitis B6
Size (bp)24273
GC content [Genome] (%)35.02[39.98]
Insertion site-
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceFN568063 (complete ICE sequence in this genome)
Replicon chromosome (2146611 bp, BioProject:46097) [NC_013853]
Genome coordinates1320241..1344513 
Putative oriT region -
Putative relaxase coordinates: 1327757..1328941; Locus tag: smi_1324;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of Tn5801(B6) is not available.



The graph information of Tn5801(B6) components from FN568063
Complete gene list of Tn5801(B6) from FN568063
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1atpE1315274..1315474 [-], 201proton-translocating ATPase, F0 sector, subunit c
2smi_13161315784..1317070 [-], 1287peptidase
3smi_13171317257..1319596 [-], 2340hypothetical protein
4smi_13181320479..1322665 [+], 2187conserved hypothetical protein
5smi_13191322662..1324455 [+], 1794conserved hypothetical protein
6smi_13201324655..1324969 [+], 315conserved hypothetical protein
7smi_13211324990..1325367 [+], 378conserved hypothetical protein
8smi_13221325377..1326150 [+], 774conserved hypothetical protein
9smi_13231326172..1327575 [+], 1404conserved hypothetical proteinOrf21_Tn, T4SS component 
10smi_13241327757..1328941 [+], 1185transcriptional regulator, Tn916Relaxase, MOBT Family
11smi_13251329225..1329446 [+], 222conserved hypothetical proteinOrf19_Tn, T4SS component 
12smi_13261329488..1330267 [+], 780conserved hypothetical protein
13smi_13271330328..1330828 [+], 501conserved hypothetical protein
14smi_13281330884..1331522 [+], 639conserved hypothetical protein
15smi_13291331594..1331989 [+], 396conserved hypothetical proteinOrf17_Tn, T4SS component 
16smi_13301331973..1334426 [+], 2454ATP/GTP-binding proteinOrf16_Tn, T4SS component 
17smi_13311334423..1336450 [+], 2028transmembrane amino acid transporter proteinOrf15_Tn, T4SS component 
18smi_13321336447..1337469 [+], 1023cell wall hydrolase, lytic transglycosylaseOrf14_Tn, T4SS component 
19smi_13331337477..1338415 [+], 939conserved hypothetical proteinOrf13_Tn, T4SS component 
20tetM1338792..1340711 [+], 1920tetracycline resistance protein TetM
21smi_13351340830..1340997 [+], 168hypothetical protein, Tn916
22smi_13361341055..1341408 [-], 354transcriptional regulator, Tn916
23smi_13371341640..1341750 [+], 111conserved hypothetical protein
24smi_13381341879..1342361 [+], 483conserved hypothetical protein
25pnpA1342358..1342588 [+], 231polyribonucleotide nucleotidyltransferase
26smi_13401343086..1343286 [+], 201conserved hypothetical protein
27smi_13411343313..1344506 [+], 1194site-specific recombinase, phage integrase familyIntegrase 
28guaA1344574..1346136 [-], 1563GMP-synthase
29smi_13431346278..1346976 [+], 699transcriptional regulator
30smi_13441347018..1347914 [-], 897conserved hypothetical protein
31smi_13451347923..1348858 [-], 936conserved hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins24Fasta
(1) Denapaite D; Bruckner R; Nuhn M; Reichmann P; Henrich B; Maurer P; Schahle Y; Selbmann P; Zimmermann W; Wambutt R; Hakenbeck R (2010). The genome of Streptococcus mitis B6--what is a commensal. PLoS One. 5(2):e9426. [PudMed:20195536]