ICEberg
I. Information of ICE
ICEberg ID421
Name ICEM This is a putative ICE identified in this study by Blast
FamilyICEM
OrganismMycoplasma mycoides subsp. capri str. GM12 transgenic clone tetM-lacZ
Size (bp)30217
GC content [Genome] (%)23.65[23.92]
Insertion siteMMCAP1_0551
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP001621 (complete ICE sequence in this genome)
Replicon[CP001621]
Genome coordinates661768..691894 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEM is not available.



The graph information of ICEM components from CP001621
Complete gene list of ICEM from CP001621
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1MMCAP1_0551659495..661999 [+], 2505putative liporotein
2MMCAP1_0552662316..663104 [+], 789conserved hypothetical integrative conjugal element protein
3MMCAP1_0553663373..664614 [+], 1242conserved hypothetical integrative conjugal element protein
4MMCAP1_0554664787..665620 [+], 834C-5 cytosine-specific DNA methylase
5MMCAP1_0555665649..667664 [+], 2016membrane protein, putative (TraD/TraG family)T4CP 
6MMCAP1_0556667680..668636 [+], 957conserved hypothetical integrative conjugal element protein
7MMCAP1_0557668620..669537 [+], 918conserved hypothetical integrative conjugal element protein
8MMCAP1_0558669552..669968 [+], 417single-strand binding family protein
9MMCAP1_0559670233..671423 [+], 1191conserved hypothetical integrative conjugal element protein
10MMCAP1_0560671661..673193 [+], 1533putative liporotein
11MMCAP1_0561673195..673386 [+], 192conserved hypothetical integrative conjugal element protein
12MMCAP1_0562673483..673713 [+], 231conserved hypothetical integrative conjugal element protein
13MMCAP1_0563673741..676464 [+], 2724putative membrane protein
14MMCAP1_0564676571..676756 [+], 186conserved hypothetical integrative conjugal element protein
15MMCAP1_0565676846..677223 [+], 378conserved hypothetical integrative conjugal element protein
16MMCAP1_0567679177..682020 [+], 2844putative membrane protein
17MMCAP1_0568682033..682698 [+], 666conserved hypothetical integrative conjugal element protein
18MMCAP1_0569682745..687712 [+], 4968putative membrane protein
19MMCAP1_0570688168..688914 [+], 747conserved hypothetical integrative conjugal element protein
20MMCAP1_0571689110..689475 [+], 366conserved hypothetical integrative conjugal element protein
21MMCAP1_0572689699..690613 [+], 915CobQ/CobB/MinD/ParA nucleotide binding domain, putative
22MMCAP1_0573690663..691895 [+], 1233conserved hypothetical integrative conjugal element protein
23MMCAP1_0574692482..695022 [+], 2541putative liporotein
24atpD_1695078..696457 [-], 1380ATP synthase F1, beta subunit
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
Identified as part of this study from CP001621