ICEberg
I. Information of ICE
ICEberg ID417
Name ICEF-IIIB(M64) This is a predicted ICE derived from literature
FamilyICEF-III
OrganismMycoplasma fermentans M64
Size (bp)20322
GC content [Genome] (%)22.48[26.86]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002458 (complete ICE sequence in this genome)
Replicon[NC_014921]
Genome coordinates510667..530988 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEF-IIIB(M64) is not available.



The graph information of ICEF-IIIB(M64) components from CP002458
Complete gene list of ICEF-IIIB(M64) from CP002458
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1MfeM64YM_0459507218..507685 [-], 468Hypothetical Protein
2MfeM64YM_0460507695..508897 [-], 1203Hypothetical Protein
3MfeM64YM_0461508918..509109 [-], 192Hypothetical Protein
4MfeM64YM_0462509340..510059 [-], 720Hypothetical Protein
5MfeM64YM_0464510780..511997 [-], 1218Conserved Hypothetical ProteinIntegrase 
6MfeM64YM_0465512073..513293 [-], 1221Hypothetical Protein
7MfeM64YM_0466513298..513543 [+], 246Hypothetical Protein
8MfeM64YM_0467513576..515951 [-], 2376Hypothetical Protein
9trsE-5515993..518722 [-], 2730TrsE-like protein
10MfeM64YM_0469518725..520107 [-], 1383Hypothetical Protein
11MfeM64YM_0470520110..520487 [-], 378Hypothetical Protein
12MfeM64YM_0471520511..522031 [-], 1521Hypothetical Protein
13MfeM64YM_0472522137..522580 [-], 444Hypothetical Protein
14MfeM64YM_0473522586..523176 [-], 591Conserved Hypothetical Protein
15MfeM64YM_0474523163..524062 [-], 900Hypothetical Protein
16MfeM64YM_0475524082..524549 [-], 468Hypothetical Protein
17MfeM64YM_0476524575..525765 [-], 1191Type II R/M system DNA methylase
18ruvB-4525749..526456 [-], 708Holliday junction ATP-dependent DNA helicase RuvB
19ruvA-4526475..526657 [-], 183Holliday junction ATP-dependent DNA helicase RuvA
20ruvA-5526639..527076 [-], 438Holliday junction ATP-dependent DNA helicase RuvA
21MfeM64YM_0480527090..527560 [-], 471Hypothetical Protein
22MfeM64YM_0481527563..527787 [-], 225Hypothetical Protein
23smf-3527804..528298 [-], 495DNA processing protein SMF
24MfeM64YM_0483528301..529167 [-], 867Conserved Hypothetical Protein
25MfeM64YM_0484529468..529743 [-], 276Hypothetical Protein
26MfeM64YM_0485530006..530884 [-], 879Hypothetical Protein
27MfeM64YM_0486531041..532156 [-], 1116Hypothetical Protein
28ligA532639..534621 [+], 1983DNA ligase
29tpiA534715..535470 [+], 756Triosephosphate isomerase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins22Fasta
(1) Shu HW; Liu TT; Chan HI; Liu YM; Wu KM; Shu HY; Tsai SF; Hsiao KJ; Hu WS; Ng WV (2011). Genome Sequence of the Repetitive-Sequence-Rich Mycoplasma fermentans Strain M64. J Bacteriol. 193(16):4302-3. [PudMed:21642450]