ICEberg
I. Information of ICE
ICEberg ID416
Name ICEF-IIA(M64) This is a predicted ICE derived from literature
FamilyICEF-I/II
OrganismMycoplasma fermentans M64
Size (bp)22332
GC content [Genome] (%)29.03[26.86]
Insertion siteMfeM64YM_0463
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002458 (complete ICE sequence in this genome)
Replicon[NC_014921]
Genome coordinates487971..510302 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEF-IIA(M64) is not available.



The graph information of ICEF-IIA(M64) components from CP002458
Complete gene list of ICEF-IIA(M64) from CP002458
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1MfeM64YM_0440485550..485885 [-], 336Transposase mutator type
2MfeM64YM_0441485902..486666 [-], 765Transposase, mutator type
3MfeM64YM_0443488347..489513 [-], 1167Conserved Hypothetical ProteinIntegrase 
4MfeM64YM_0444489561..490487 [-], 927Hypothetical Protein
5MfeM64YM_0445490721..490849 [-], 129Hypothetical Protein
6MfeM64YM_0446491077..495342 [-], 4266Hypothetical Protein
7MfeM64YM_0447495388..496071 [-], 684Conserved Hypothetical Protein
8trsE-4496052..498865 [-], 2814TrsE-like protein
9MfeM64YM_0449498881..500071 [-], 1191Hypothetical Protein
10MfeM64YM_0450500071..500352 [-], 282Hypothetical Protein
11MfeM64YM_0451500467..502035 [-], 1569Conserved Hypothetical Protein
12MfeM64YM_0452502059..502313 [-], 255Hypothetical Protein
13MfeM64YM_0453502313..502864 [-], 552Putative Single-stranded DNA-binding protein
14MfeM64YM_0454502874..503590 [-], 717Conserved Hypothetical Protein
15MfeM64YM_0455503603..503842 [-], 240Hypothetical Protein
16MfeM64YM_0456503851..504798 [-], 948Conserved Hypothetical Protein
17MfeM64YM_0457504800..504988 [-], 189Hypothetical Protein
18MfeM64YM_0458504999..507218 [-], 2220Conserved Hypothetical ProteinT4CP 
19MfeM64YM_0459507218..507685 [-], 468Hypothetical Protein
20MfeM64YM_0460507695..508897 [-], 1203Hypothetical Protein
21MfeM64YM_0461508918..509109 [-], 192Hypothetical Protein
22MfeM64YM_0462509340..510059 [-], 720Hypothetical Protein
23MfeM64YM_0464510780..511997 [-], 1218Conserved Hypothetical ProteinIntegrase 
24MfeM64YM_0465512073..513293 [-], 1221Hypothetical Protein
25MfeM64YM_0466513298..513543 [+], 246Hypothetical Protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
(1) Shu HW; Liu TT; Chan HI; Liu YM; Wu KM; Shu HY; Tsai SF; Hsiao KJ; Hu WS; Ng WV (2011). Genome Sequence of the Repetitive-Sequence-Rich Mycoplasma fermentans Strain M64. J Bacteriol. 193(16):4302-3. [PudMed:21642450]