ICEberg
I. Information of ICE
ICEberg ID414
Name ICEF-IIIA1(M64) This is a predicted ICE derived from literature
FamilyICEF-III
OrganismMycoplasma fermentans M64
Size (bp)20810
GC content [Genome] (%)22.53[26.86]
Insertion sitetnpA-23(MfeM64YM_0095)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002458 (complete ICE sequence in this genome)
Replicon[NC_014921]
Genome coordinates89996..110805 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEF-IIIA1(M64) is not available.



The graph information of ICEF-IIIA1(M64) components from CP002458
Complete gene list of ICEF-IIIA1(M64) from CP002458
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1MfeM64YM_009085572..85706 [+], 135Hypothetical Protein
2MfeM64YM_009185697..85885 [+], 189Hypothetical Protein
3MfeM64YM_009285944..87041 [+], 1098Hypothetical Protein
4MfeM64YM_009387116..88279 [+], 1164Hypothetical Protein
5MfeM64YM_009488289..89077 [+], 789Hypothetical Protein
6MfeM64YM_009690100..90978 [+], 879Hypothetical Protein
7MfeM64YM_009791241..91516 [+], 276Hypothetical Protein
8MfeM64YM_009891817..92683 [+], 867Conserved Hypothetical Protein
9smf-192686..93180 [+], 495DNA processing protein SMF
10MfeM64YM_010093198..93656 [+], 459Hypothetical Protein
11MfeM64YM_010193855..94079 [+], 225Hypothetical Protein
12MfeM64YM_010294082..94552 [+], 471Hypothetical Protein
13ruvA-194566..95003 [+], 438Holliday junction ATP-dependent DNA helicase RuvA
14MfeM64YM_010494985..95167 [+], 183Hypothetical Protein
15ruvB-195186..95893 [+], 708Holliday junction ATP-dependent DNA helicase RuvB
16MfeM64YM_010695877..97067 [+], 1191Type II R/M system DNA methylase
17MfeM64YM_010797093..97560 [+], 468Hypothetical Protein
18MfeM64YM_010897580..98479 [+], 900Conserved Hypothetical Protein
19MfeM64YM_010998466..99056 [+], 591Conserved Hypothetical Protein
20MfeM64YM_011099062..99505 [+], 444Hypothetical Protein
21MfeM64YM_011199611..101131 [+], 1521Hypothetical Protein
22MfeM64YM_0112101155..101532 [+], 378Hypothetical Protein
23MfeM64YM_0113101535..102917 [+], 1383Hypothetical Protein
24trsE-1102920..105649 [+], 2730TrsE-like protein
25MfeM64YM_0115105691..109344 [+], 3654Hypothetical Protein
26MfeM64YM_0116109420..110640 [+], 1221Conserved Hypothetical ProteinIntegrase 
27MfeM64YM_0118111466..112014 [-], 549DNA methylase
28def112085..112654 [+], 570Peptide deformylase
29MfeM64YM_0120112669..114114 [+], 1446Hypothetical Protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins21Fasta
(1) Shu HW; Liu TT; Chan HI; Liu YM; Wu KM; Shu HY; Tsai SF; Hsiao KJ; Hu WS; Ng WV (2011). Genome Sequence of the Repetitive-Sequence-Rich Mycoplasma fermentans Strain M64. J Bacteriol. 193(16):4302-3. [PudMed:21642450]