ICEberg
I. Information of ICE
ICEberg ID359
Name ICESauCOL-1 This is a putative ICE identified in this study by Blast
FamilyICE6013
OrganismStaphylococcus aureus subsp. aureus COL
Size (bp)13339
GC content [Genome] (%)30.18[32.81]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP000046 (complete ICE sequence in this genome)
Replicon chromosome (2809422 bp, BioProject:238) [NC_002951]
Genome coordinates1607901..1621239 
Putative oriT region -
Putative relaxase coordinates: 1618850..1619941; Locus tag: SACOL1583;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESauCOL-1 is not available.



The graph information of ICESauCOL-1 components from CP000046
Complete gene list of ICESauCOL-1 from CP000046
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1xseB1603544..1603774 [-], 231exodeoxyribonuclease VII, small subunit
2xseA1603767..1605104 [-], 1338exodeoxyribonuclease VII, large subunit
3nusB1605121..1605510 [-], 390N utilization substance protein B
4SACOL15701605570..1605932 [-], 363conserved hypothetical protein
5accC1605947..1607302 [-], 1356acetyl-CoA carboxylase, biotin carboxylase
6accB1607302..1607766 [-], 465acetyl-CoA carboxylase, biotin carboxyl carrier protein
7SACOL15741609250..1609591 [-], 342conserved hypothetical protein
8SACOL15751609647..1610237 [-], 591hypothetical protein
9SACOL15761610244..1611290 [-], 1047traG protein, putativePrgK, T4SS component 
10SACOL15771611280..1613127 [-], 1848conserved hypothetical proteinYddG, T4SS component 
11SACOL15781613132..1614490 [-], 1359FtsK/SpoIIIE family proteinYdcQ, T4SS component 
12SACOL15791614544..1617039 [-], 2496conserved hypothetical proteinYddE, T4SS component 
13SACOL15801617074..1617457 [-], 384hypothetical proteinYddD, T4SS component 
14SACOL15811617469..1617729 [-], 261conserved hypothetical proteinYddC, T4SS component 
15SACOL15821617734..1618789 [-], 1056conserved hypothetical proteinYddB, T4SS component 
16SACOL15831618850..1619941 [-], 1092replication initiation factor family proteinRelaxase, MOBT Family
17SACOL15841620116..1620418 [-], 303hypothetical protein
18SACOL15851620432..1620752 [-], 321conserved hypothetical protein
19SACOL15861620903..1621187 [-], 285hypothetical protein
20efp1621582..1622139 [-], 558translation elongation factor P
21SACOL15881622165..1623226 [-], 1062proline dipeptidase
22SACOL15891623331..1623912 [+], 582lipoprotein, putative
23SACOL15901623926..1624144 [+], 219conserved hypothetical protein
24SACOL15911624208..1625038 [-], 831lipoate-protein ligase A family protein
25SACOL15921625196..1625582 [+], 387rhodanese-like domain protein
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins13Fasta
Identified as part of this study from CP000046