ICEberg
I. Information of ICE
ICEberg ID355
Name ICESa2 This is a predicted ICE derived from literature
FamilyICE6013
OrganismStaphylococcus aureus subsp. aureus ST398
Size (bp)15304
GC content [Genome] (%)32.34
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAM990992 (complete ICE sequence in this genome)
Replicon chromosome (2872582 bp, BioProject:29427) [AM990992]
Genome coordinates1956986..1972289 
Putative oriT region -
Putative relaxase coordinates: 1969283..1970113; Locus tag: SAPIG1864;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESa2 is not available.



The graph information of ICESa2 components from AM990992
Complete gene list of ICESa2 from AM990992
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SAPIG18431952509..1952766 [+], 258conserved hypothetical protein
2menC1952763..1953764 [-], 1002O-succinylbenzoic acid (OSB) synthetase
3menE1953769..1955247 [-], 1479O-succinylbenzoate-CoA ligase
4SAPIG18451955406..1955888 [-], 483lipoprotein, putative
5SAPIG18461956200..1956427 [+], 228hypothetical protein
6SAPIG18471956685..1956984 [-], 300transposase InsI for insertion sequence element IS30B/C/D
7SAPIG18481956986..1957126 [+], 141hypothetical protein
8SAPIG18491957139..1957669 [-], 531transposase of
9SAPIG18501957781..1958143 [-], 363lipoprotein, putative
10SAPIG18511958190..1958783 [-], 594conserved hypothetical protein
11SAPIG18521958789..1959817 [-], 1029transfer complex protein TraGOrf13_p, T4SS component 
12SAPIG18531959807..1961738 [-], 1932membrane protein, putativeYddG, T4SS component 
13SAPIG18541961838..1962239 [-], 402hypothetical protein
14SAPIG18551962244..1963602 [-], 1359ftsk/spoiiie family proteinYdcQ, T4SS component 
15SAPIG18561963607..1963939 [-], 333hypothetical protein
16SAPIG18571963936..1964166 [-], 231hypothetical protein
17SAPIG18581964170..1964388 [-], 219hypothetical protein
18SAPIG18591964400..1966895 [-], 2496conserved hypothetical proteinYddE, T4SS component 
19SAPIG18601966930..1967319 [-], 390conserved hypothetical proteinYddD, T4SS component 
20SAPIG18611967325..1967585 [-], 261conserved hypothetical proteinYddC, T4SS component 
21SAPIG18621967590..1968666 [-], 1077conserved hypothetical proteinYddB, T4SS component 
22SAPIG18631968741..1969103 [-], 363conserved hypothetical protein
23SAPIG18641969283..1970113 [-], 831replication initiation factor family proteinRelaxase, MOBT Family
24SAPIG18651970588..1971013 [-], 426hypothetical protein
25SAPIG18661971035..1971358 [-], 324hypothetical protein
26SAPIG18671971879..1972289 [+], 411excalibur domain protein
27SAPIG18681972370..1973365 [+], 996conserved hypothetical protein
28SAPIG18691973441..1974067 [+], 627lipoprotein, putative
29SAPIG18701974108..1974452 [+], 345conserved hypothetical protein
30SAPIG18711974550..1975122 [+], 573conserved hypothetical protein
31SAPIG18721975320..1975877 [-], 558conserved hypothetical protein
32SAPIG18731976248..1976424 [-], 177conserved hypothetical protein
33SAPIG18741976435..1976818 [-], 384conserved hypothetical protein
34SAPIG18751976920..1977225 [-], 306transposase
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
(1) Schijffelen MJ; Boel CH; van Strijp JA; Fluit AC (2010). Whole genome analysis of a livestock-associated methicillin-resistant Staphylococcus aureus ST398 isolate from a case of human endocarditis. BMC Genomics. 0.719444444. [PudMed:20546576]