ICEberg
I. Information of ICE
ICEberg ID353
Name ICESauED98-1 This is a putative ICE identified in this study by Blast
FamilyICE6013
OrganismStaphylococcus aureus subsp. aureus ED98
Size (bp)13354
GC content [Genome] (%)30.06[32.84]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP001781 (complete ICE sequence in this genome)
Replicon chromosome (2824404 bp, BioProject:41455) [NC_013450]
Genome coordinates1964665..1978018 
Putative oriT region -
Putative relaxase coordinates: 1965963..1967054; Locus tag: SAAV_1931;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESauED98-1 is not available.



The graph information of ICESauED98-1 components from CP001781
Complete gene list of ICESauED98-1 from CP001781
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SAAV_19221959893..1960207 [-], 315hypothetical protein
2recX1960185..1961003 [-], 819recombination regulator RecX
3SAAV_19241961263..1962072 [-], 810glycosyltransferase
4SAAV_19251962412..1962927 [-], 516ThiJ/PfpI family protein
5SAAV_19261963058..1963219 [-], 162hypothetical protein
6SAAV_19271963443..1964594 [+], 1152conserved hypothetical protein
7SAAV_19281964717..1965001 [+], 285conserved hypothetical protein, transposon-related protein
8SAAV_19291965152..1965472 [+], 321conserved hypothetical protein, transposon-related protein
9SAAV_19301965486..1965788 [+], 303conserved hypothetical protein, transposon-related protein
10SAAV_19311965963..1967054 [+], 1092replication initiation factor family proteinRelaxase, MOBT Family
11SAAV_19321967115..1968170 [+], 1056conserved hypothetical protein, transposon-related proteinYddB, T4SS component 
12SAAV_19331968175..1968435 [+], 261conserved hypothetical protein, transposon-related proteinYddC, T4SS component 
13SAAV_19341968447..1968830 [+], 384conserved hypothetical protein, transposon-related proteinYddD, T4SS component 
14SAAV_19351968865..1971360 [+], 2496conserved hypothetical protein, transposon-related proteinYddE, T4SS component 
15SAAV_19361971414..1972772 [+], 1359ftsk/spoiiie family proteinYdcQ, T4SS component 
16SAAV_19371972777..1974624 [+], 1848conserved hypothetical protein, transposon-related proteinYddG, T4SS component 
17SAAV_19381974614..1975660 [+], 1047Putative TraG proteinPrgK, T4SS component 
18SAAV_19391975667..1976257 [+], 591conserved hypothetical protein, transposon-related protein
19SAAV_19401976313..1976669 [+], 357lipoprotein, putative
20SAAV_19411976778..1977281 [+], 504transposase
21SAAV_19421977349..1977798 [+], 450transposaseIntegrase 
22SAAV_19431978211..1978741 [-], 531hypothetical protein
23pepS1978831..1980078 [-], 1248aminopeptidase PepS
24SAAV_19451980090..1980290 [-], 201hypothetical protein
25SAAV_19461980437..1980901 [+], 465phosphotyrosine protein phosphatase
26SAAV_19471980908..1981183 [+], 276hypothetical protein
27SAAV_19481981461..1982678 [+], 1218ribonuclease BN, putative
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins15Fasta
Identified as part of this study from CP001781