ICEberg
I. Information of ICE
ICEberg ID345
Name ICEBxyXB1A-1 This is a putative ICE identified in this study by Blast
FamilyCTnDOT/ERL
OrganismBacteroides xylanisolvens XB1A
Size (bp)52240
GC content [Genome] (%)50.6
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFP929033 (complete ICE sequence in this contig)
Replicon[FP929033]
Coordinates4227232..4279471 
Putative oriT region -
Putative relaxase coordinates: 4246668..4247918; Locus tag: BXY_33850;  Family:  MOBP


II. ICE interaction with IME/CIME/

The interaction information of ICEBxyXB1A-1 is not available.



The graph information of ICEBxyXB1A-1 components from FP929033
Complete gene list of ICEBxyXB1A-1 from FP929033
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1BXY_335104222703..4223347 [+], 645Multiple antibiotic transporter
2BXY_335204224906..4225517 [+], 612Bacterial DNA-binding protein.
3BXY_335304225748..4227277 [+], 1530hypothetical protein
4BXY_335404227317..4227514 [-], 198hypothetical protein
5BXY_335504227623..4228075 [+], 453hypothetical protein
6BXY_335604228087..4228332 [-], 246hypothetical protein
7BXY_335704228464..4228685 [+], 222hypothetical protein
8BXY_335804228699..4229121 [+], 423hypothetical protein
9BXY_336004229562..4230413 [+], 852hypothetical protein
10BXY_336104230438..4230695 [+], 258hypothetical protein
11BXY_336204230728..4230949 [+], 222hypothetical protein
12BXY_336304230946..4231191 [+], 246hypothetical protein
13BXY_336404231237..4231545 [+], 309hypothetical protein
14BXY_336504231663..4231884 [+], 222hypothetical protein
15BXY_336604231948..4232475 [-], 528Phage-related lysozyme (muraminidase)
16BXY_336704232472..4232975 [-], 504hypothetical protein
17BXY_336804232972..4233883 [-], 912DNA primase (bacterial type)
18BXY_336904233883..4234377 [-], 495Conjugative transposon protein TraO.
19BXY_337004234461..4235447 [-], 987hypothetical protein
20BXY_337104235492..4236862 [-], 1371Protein of unknown function (DUF3714).
21BXY_337204236831..4237151 [-], 321hypothetical protein
22BXY_337304237158..4237781 [-], 624hypothetical protein
23BXY_337404237813..4238817 [-], 1005Homologues of TraJ from Bacteroides conjugative transposon.
24BXY_337604239474..4239833 [-], 360hypothetical protein
25BXY_337704239884..4242376 [-], 2493Domain of unknown function DUF87.
26BXY_337904242735..4243046 [-], 312hypothetical protein
27BXY_338004243249..4243977 [-], 729hypothetical protein
28BXY_338104243999..4244346 [-], 348Protein of unknown function (DUF3408).
29BXY_338204244349..4244789 [-], 441Protein of unknown function (DUF3408).
30BXY_338404246264..4246689 [+], 426hypothetical protein
31BXY_338504246668..4247918 [+], 1251Relaxase/Mobilisation nuclease domain.Relaxase, MOBP Family
32BXY_338604247951..4249960 [+], 2010Type IV secretory pathway, VirD4 componentsT4CP 
33BXY_338704250335..4251549 [+], 1215Transposase and inactivated derivatives
34BXY_338804251643..4253283 [-], 1641Superfamily I DNA and RNA helicases
35BXY_338904253288..4255069 [-], 1782Predicted ATP-dependent endonuclease of the OLD family
36BXY_339004255089..4256219 [-], 1131Predicted ATPase (AAA+ superfamily)
37BXY_339104256519..4257136 [-], 618RteC protein.
38BXY_339204257347..4257760 [-], 414RibD C-terminal domain.
39BXY_339304258042..4259364 [-], 1323Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
40BXY_339404259357..4261675 [-], 2319Signal transduction histidine kinase
41BXY_339504261675..4263600 [-], 1926small GTP-binding protein domain
42BXY_339604263857..4264714 [-], 858Acetyltransferases
43BXY_339704264726..4265103 [-], 378SnoaL-like polyketide cyclase.
44BXY_339804265688..4271531 [-], 5844Helicase conserved C-terminal domain./SNF2 family N-terminal domain./N-6 DNA Methylase.
45BXY_339904271521..4271973 [-], 453Domain of unknown function (DUF1896).
46BXY_340004272137..4274227 [-], 2091DNA topoisomerase III, bacteria and conjugative plasmid
47BXY_340104274287..4275876 [-], 1590hypothetical protein
48BXY_340204275896..4276246 [-], 351hypothetical protein
49BXY_340304276250..4276606 [-], 357DNA binding domain, excisionase family
50BXY_340404276815..4277108 [+], 294hypothetical protein
51BXY_340504277140..4277448 [+], 309DNA binding domain, excisionase family
52BXY_340604277526..4277888 [-], 363hypothetical protein
53BXY_340704277901..4279136 [-], 1236Site-specific recombinase XerDIntegrase 
54BXY_340804279563..4280585 [+], 1023hypothetical protein
55BXY_340904280939..4284067 [+], 3129Outer membrane receptor proteins, mostly Fe transport
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins50Fasta
Identified as part of this study from FP929033