ICEberg
I. Information of ICE
ICEberg ID342
Name ICEBglBSR3-1 This is a putative ICE identified in this study by Blast
FamilyTn4371
OrganismBurkholderia gladioli BSR3
Size (bp)42673
GC content [Genome] (%)62.15
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceCP002599 (complete ICE sequence in this genome)
Replicon[NC_015381]
Genome coordinates2871875..2914547 
Putative oriT region -
Putative relaxase coordinates: 2890870..2892831; Locus tag: bgla_1g25110;  Family:  MOBL


II. ICE interaction with IME/CIME/

The interaction information of ICEBglBSR3-1 is not available.



The graph information of ICEBglBSR3-1 components from CP002599
Complete gene list of ICEBglBSR3-1 from CP002599
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1bgla_1g248702866984..2868006 [+], 1023hypothetical protein
2bgla_1g248802868042..2869874 [+], 1833hypothetical protein
3bgla_1g248902869878..2871611 [+], 1734predicted DNA helicase
4bgla_1g249002871651..2871878 [-], 228hypothetical protein
5bgla_1g249102871875..2873191 [-], 1317conjugation TrbI family proteinTrbI, T4SS component 
6bgla_1g249202873194..2874192 [-], 999P-type conjugative transfer protein TrbGTrbG, T4SS component 
7bgla_1g249302874189..2874896 [-], 708conjugal transfer protein TrbFTrbF, T4SS component 
8bgla_1g249402874920..2876296 [-], 1377TrbL/VirB6 plasmid conjugal transfer proteinTrbL, T4SS component 
9bgla_1g249502876308..2877036 [-], 729P-type conjugative transfer protein TrbJTrbJ, T4SS component 
10bgla_1g249602877033..2879483 [-], 2451ATPaseTrbE, T4SS component 
11bgla_1g249702879498..2879767 [-], 270conjugal transfer protein trbDTrbD, T4SS component 
12bgla_1g249802879764..2880147 [-], 384Conjugal transfer protein TrbCTrbC, T4SS component 
13bgla_1g249902880144..2881163 [-], 1020P-type conjugative transfer ATPase TrbBTrbB, T4SS component 
14bgla_1g250002881160..2881636 [-], 477CopG domain protein DNA-binding domain protein
15bgla_1g250102881633..2883636 [-], 2004conjugal transfer protein TraGVirD4, T4SS component 
16bgla_1g250202883858..2884106 [-], 249putative lipoproteinTrbJ, T4SS component 
17bgla_1g250302884103..2885047 [-], 945transcriptional regulator, LysR family
18bgla_1g250402885137..2886336 [-], 1200hypothetical protein
19bgla_1g250502886556..2887461 [-], 906Pirin domain protein
20bgla_1g250602887563..2888171 [-], 609putative acyl carrier protein phosphodiesterase
21bgla_1g250802888692..2889711 [-], 1020short-chain dehydrogenase/reductase SDR
22bgla_1g250902889789..2890202 [+], 414transposase
23bgla_1g251002890252..2890692 [+], 441transcriptional regulator
24bgla_1g251102890870..2892831 [-], 1962type IV secretory pathway VirD2 componentRelaxase, MOBL Family
25bgla_1g251202892828..2893271 [-], 444hypothetical protein
26bgla_1g251302893268..2893870 [-], 603hypothetical proteinTraF, T4SS component 
27bgla_1g251402893867..2894400 [-], 534hypothetical protein
28bgla_1g251502894397..2894672 [-], 276hypothetical protein
29bgla_1g251602894669..2895307 [-], 639cobyrinic Acid a,c-diamide synthase
30bgla_1g251702895549..2896397 [-], 849replication protein A
31bgla_1g251802896412..2896693 [-], 282hypothetical protein
32bgla_1g251902896819..2897574 [-], 756hypothetical protein
33bgla_1g252002897898..2898248 [-], 351hypothetical protein
34bgla_1g252102898568..2898861 [+], 294XRE family transcriptional regulator
35bgla_1g252202898931..2899248 [-], 318hypothetical proteinTraF, T4SS component 
36bgla_1g252402900012..2902063 [-], 2052nuclease
37bgla_1g252502902142..2902966 [-], 825hypothetical protein
38bgla_1g252802903631..2904773 [+], 1143hypothetical protein
39bgla_1g252902904777..2905394 [+], 618hypothetical protein
40bgla_1g253002905391..2905876 [+], 486hypothetical protein
41bgla_1g253102905879..2906460 [+], 582hypothetical protein
42bgla_1g253202906549..2907997 [+], 1449hypothetical protein
43bgla_1g253302908026..2908583 [+], 558hypothetical protein
44bgla_1g253402908725..2909387 [-], 663hypothetical protein
45bgla_1g253502909384..2910523 [-], 1140hypothetical protein
46bgla_1g253602910527..2911153 [-], 627hypothetical protein
47bgla_1g253702911153..2911620 [-], 468hypothetical protein
48bgla_1g253802911933..2912316 [+], 384phage transcriptional regulator, AlpA
49bgla_1g253902912481..2912897 [-], 417HTH domain DNA binding protein
50bgla_1g254002912899..2913210 [-], 312hypothetical protein
51bgla_1g254102913291..2914547 [-], 1257phage integraseIntegrase 
52bgla_1g254202914859..2916478 [-], 1620GMP synthase, large subunit
53bgla_1g254302916615..2917280 [-], 666hypothetical protein
54bgla_1g254402917287..2918747 [-], 1461Inosine-5'-monophosphate dehydrogenase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins47Fasta
Identified as part of this study from CP002599