ICEberg
I. Information of ICE
ICEberg ID331
Name ICESpnH19A6-1 This is a putative ICE identified in this study by Blast
FamilyTn916
OrganismStreptococcus pneumoniae Hungary19A-6
Size (bp)20884
GC content [Genome] (%)38.24[39.63]
Insertion siteAT rich regions
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP000936 (complete ICE sequence in this genome)
Replicon chromosome (2245615 bp, BioProject:28035) [NC_010380]
Genome coordinates1302035..1322918 
Putative oriT region -
Putative relaxase coordinates: 1319046..1320275; Locus tag: SPH_1422;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESpnH19A6-1 is not available.



The graph information of ICESpnH19A6-1 components from CP000936
Complete gene list of ICESpnH19A6-1 from CP000936
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SPH_13971297490..1297807 [+], 318BlpT protein, fusion
2SPH_13981298046..1299605 [+], 1560ABC transporter, ATP-binding protein
3SPH_13991299754..1300653 [-], 900putative Probable protease HtpX homolog
4SPH_14001300655..1301215 [-], 561cytoplasmic membrane protein
5gidB1301309..1302022 [+], 714methyltransferase GidB
6SPH_14021302209..1303426 [-], 1218transposase from transposon (Integrase)Integrase 
7SPH_14031303508..1303711 [-], 204conserved domain protein
8SPH_14041303695..1303946 [+], 252conserved hypothetical protein
9SPH_14051304172..1304402 [-], 231conserved hypothetical protein
10SPH_14061304399..1304821 [-], 423sigma-70, region 4 family
11SPH_14071305050..1305196 [-], 147conserved hypothetical protein
12SPH_14081305326..1305679 [+], 354transcriptional regulator, putative
13SPH_14091306025..1307944 [-], 1920tetracycline resistance protein
14SPH_14101307960..1308076 [-], 117Tetracycline resistance determinant leader peptide
15SPH_14111308321..1309238 [-], 918conjugative transposon proteinOrf13_Tn, T4SS component 
16SPH_14121309253..1310254 [-], 1002NLP/P60 family proteinOrf14_Tn, T4SS component 
17SPH_14131310251..1312428 [-], 2178conjugative transposon membrane proteinOrf15_Tn, T4SS component 
18SPH_14141312431..1314878 [-], 2448conjugative transposon proteinOrf16_Tn, T4SS component 
19SPH_14151314862..1315368 [-], 507conjugative transposon membrane proteinOrf17_Tn, T4SS component 
20SPH_14161315343..1315840 [-], 498conjugative transposon protein
21SPH_14171315957..1316178 [-], 222conserved domain proteinOrf19_Tn, T4SS component 
22SPH_14181316358..1317605 [+], 1248transposase
23SPH_14191317726..1317917 [-], 192conserved hypothetical protein
24SPH_14201317862..1318599 [-], 738rRNA adenine N-6-methyltransferase (Macrolide-lincosamide-streptogramin B resistance protein)
25SPH_14221319046..1320275 [-], 1230transcriptional regulator, Cro/CI familyRelaxase, MOBT Family
26SPH_14231320453..1321838 [-], 1386ftsk/spoiiie family proteinOrf21_Tn, T4SS component 
27SPH_14241321867..1322250 [-], 384conjugative transposon protein
28SPH_14251322269..1322583 [-], 315conjugative transposon protein
29SPH_14261322606..1322725 [-], 120conserved hypothetical protein
30uraA1323215..1324498 [+], 1284uracil permease
31ffh1324594..1326165 [-], 1572signal recognition particle protein
32SPH_14291326177..1326509 [-], 333putative helix-turn-helix protein
33SPH_14301326600..1326977 [-], 378conserved hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins24Fasta
Identified as part of this study from CP000936