ICEberg
I. Information of ICE
ICEberg ID320
Name ICESpnTw19F14-1 This is a putative ICE identified in this study by Blast
FamilyTn916
OrganismStreptococcus pneumoniae Taiwan19F-14
Size (bp)23541
GC content [Genome] (%)38.31[39.77]
Insertion siteAT rich regions
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP000921 (complete ICE sequence in this genome)
Replicon chromosome (2112148 bp, BioProject:28037) [NC_012469]
Genome coordinates1785161..1808701 
Putative oriT region -
Putative relaxase coordinates: 1787804..1789009; Locus tag: SPT_1910;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESpnTw19F14-1 is not available.



The graph information of ICESpnTw19F14-1 components from CP000921
Complete gene list of ICESpnTw19F14-1 from CP000921
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SPT_19001780883..1781899 [-], 1017regulator of lytrabc operon
2SPT_19011781907..1782425 [-], 519acetyltransferase, gnat family
3SPT_19021782415..1782858 [-], 444conserved hypothetical protein
4SPT_19031782944..1783564 [-], 621lipoprotein, putative
5SPT_19041783870..1784733 [-], 864transcriptional activator
6SPT_19051784924..1785094 [+], 171conserved hypothetical protein
7SPT_19061785354..1785473 [+], 120hypothetical protein
8SPT_19071785496..1785810 [+], 315conjugative transposon protein
9SPT_19081785829..1786212 [+], 384conjugative transposon protein
10SPT_19091786241..1787626 [+], 1386ftsk/spoiiie family proteinOrf21_Tn, T4SS component 
11SPT_19101787804..1789009 [+], 1206transcriptional regulator, Cro/CI familyRelaxase, MOBT Family
12SPT_19111789052..1789273 [+], 222conserved domain proteinOrf19_Tn, T4SS component 
13SPT_19121789390..1789887 [+], 498conjugative transposon protein
14SPT_19131789862..1790368 [+], 507conjugative transposon membrane proteinOrf17_Tn, T4SS component 
15SPT_19141790352..1792799 [+], 2448conjugative transposon proteinOrf16_Tn, T4SS component 
16SPT_19151792802..1794979 [+], 2178conjugative transposon membrane proteinOrf15_Tn, T4SS component 
17SPT_19161794976..1795977 [+], 1002NLP/P60 family proteinOrf14_Tn, T4SS component 
18SPT_19171795974..1796906 [+], 933conjugative transposon proteinOrf13_Tn, T4SS component 
19SPT_19181797181..1797267 [+], 87tetracycline resistance determinant leader peptide
20SPT_19191797283..1799202 [+], 1920tetracycline resistance protein
21SPT_19221799808..1800143 [+], 336conserved hypothetical protein
22SPT_19231800213..1800524 [+], 312conserved hypothetical protein
23SPT_19241800511..1800810 [+], 300conserved hypothetical protein
24SPT_19251800928..1802391 [-], 1464Mel protein
25SPT_19261802511..1803728 [-], 1218macrolide-efflux protein
26SPT_19271804114..1804284 [-], 171conserved hypothetical protein
27SPT_19281805057..1805410 [-], 354transcriptional regulator, putative
28SPT_19291805915..1806337 [+], 423sigma-70, region 4 family
29SPT_19301807025..1807228 [+], 204conserved domain protein
30SPT_19311807310..1808527 [+], 1218transposase from transposon (Integrase)Integrase 
31SPT_19321808877..1809017 [+], 141hypothetical protein
32SPT_19331809418..1811433 [+], 2016bacteriocin-associated integral membrane protein
33SPT_19341811435..1812067 [+], 633ABC-type antimicrobial peptide transport system, ATPase component
34SPT_19351812208..1812369 [+], 162conserved hypothetical protein
35SPT_19361812995..1813408 [-], 414nucleoside diphosphate kinase (NDK) (NDP kinase)(Abnormal wing disks protein) (Killer of prune protein)
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins24Fasta
Identified as part of this study from CP000921