ICEberg
I. Information of ICE
ICEberg ID316
Name ICESpnCGSP14-1 This is a predicted ICE derived from literature
FamilyTn916
OrganismStreptococcus pneumoniae CGSP14
Size (bp)23124
GC content [Genome] (%)37.77[39.46]
Insertion siteAT rich regions
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP001033 (complete ICE sequence in this genome)
Replicon chromosome (2209198 bp, BioProject:29179) [NC_010582]
Genome coordinates159595..182718 
Putative oriT region -
Putative relaxase coordinates: 162238..163443; Locus tag: SPCG_0162;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESpnCGSP14-1 is not available.



The graph information of ICESpnCGSP14-1 components from CP001033
Complete gene list of ICESpnCGSP14-1 from CP001033
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SPCG_0153154645..155499 [+], 855lipoprotein
2SPCG_0154155596..156969 [+], 1374hypothetical protein
3SPCG_0155156962..158023 [+], 1062ABC transporter, ATP-binding protein
4SPCG_0156158025..158717 [+], 693ABC transporter, permease protein, putative
5SPCG_0157158833..159606 [+], 774transcriptional activator, Rgg/GadR/MutR family protein, C-terminal domain
6SPCG_0158159788..159907 [+], 120hypothetical protein
7SPCG_0159159930..160244 [+], 315hypothetical protein
8SPCG_0160160260..160646 [+], 387hypothetical protein
9SPCG_0161160675..162060 [+], 1386hypothetical proteinOrf21_Tn, T4SS component 
10SPCG_0162162238..163443 [+], 1206Tn916, transcriptional regulator, putativeRelaxase, MOBT Family
11SPCG_0163163486..163707 [+], 222hypothetical proteinOrf19_Tn, T4SS component 
12SPCG_0164163824..164321 [+], 498hypothetical protein
13SPCG_0165164296..164802 [+], 507hypothetical proteinOrf17_Tn, T4SS component 
14SPCG_0166164735..167233 [+], 2499hypothetical proteinOrf16_Tn, T4SS component 
15SPCG_0167167236..169413 [+], 2178hypothetical proteinOrf15_Tn, T4SS component 
16SPCG_0168169410..170411 [+], 1002hypothetical proteinOrf14_Tn, T4SS component 
17SPCG_0169170408..171343 [+], 936hypothetical proteinOrf13_Tn, T4SS component 
18SPCG_0170171618..171704 [+], 87tet(M) leader peptide
19SPCG_0171171705..173639 [+], 1935tetracycline resistance protein TetM
20SPCG_0172174564..175301 [+], 738rRNA methylase
21SPCG_0173175656..176210 [+], 555resolvase
22SPCG_0174176214..179132 [+], 2919transposase
23SPCG_0175179188..179427 [-], 240hypothetical protein
24SPCG_0176179923..180354 [+], 432hypothetical protein
25SPCG_0177180351..180581 [+], 231hypothetical protein
26SPCG_0178181042..181245 [+], 204hypothetical protein
27SPCG_0179181327..182544 [+], 1218hypothetical proteinIntegrase 
28SPCG_0180182961..184277 [+], 1317hypothetical protein
29SPCG_0181184315..184518 [+], 204hypothetical protein
30SPCG_0182184713..185375 [-], 663hypothetical protein
31SPCG_0183185632..186213 [+], 582hypothetical protein
32SPCG_0184186159..186761 [+], 603hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins22Fasta
(1) Ding F; Tang P; Hsu MH; Cui P; Hu S; Yu J; Chiu CH (2009). Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14. BMC Genomics. 0.526388889. [PudMed:19361343]