ICEberg
I. Information of ICE
ICEberg ID240
Name ICEMmc95010-1a This is a predicted ICE derived from literature
FamilyICEM
OrganismMycoplasma mycoides subsp. capri LC str. 95010
Size (bp)30052
GC content [Genome] (%)23.59[23.82]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFQ377874 (complete ICE sequence in this genome)
Replicon[NC_015431]
Genome coordinates270699..300750 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEMmc95010-1a is not available.



The graph information of ICEMmc95010-1a components from FQ377874
Complete gene list of ICEMmc95010-1a from FQ377874
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1typA266221..268050 [-], 1830GTP binding protein TypA/BipA homolog
2MLC_2050268295..269071 [+], 777Conserved hypothetical protein, predicted lipoprotein, DUF285 family
3MLC_2060269117..269908 [+], 792Conserved hypothetical protein, predicted lipoprotein, DUF285 family
4MLC_2070270037..270465 [+], 429Conserved hypothetical protein, predicted lipoprotein, interrupted by an ICE
5MLC_2080270699..271487 [+], 789CDS1, conserved hypothetical protein (part of ICE)
6MLC_2090271756..273000 [+], 1245CDS3, putative relaxase (part of ICE)
7MLC_2100273036..273479 [+], 444Hypothetical protein (part of ICE)
8MLC_2110273942..274208 [+], 267Hypothetical protein (part of ICE)
9MLC_2120274307..274633 [+], 327Hypothetical protein (part of ICE)
10MLC_2130274645..276660 [+], 2016CDS5, predicted transmembrane protein with a TraG/VirD4 domain (part of ICE)T4CP 
11MLC_2140276675..277394 [+], 720Conserved hypothetical protein, DUF285 family (part of ICE)
12MLC_2150277409..277825 [+], 417Single stranded DNA binding protein (part of ICE)
13MLC_2160277863..279053 [+], 1191CDSA, conserved hypothetical protein (part of ICE)
14MLC_2170279291..280817 [+], 1527Conserved hypothetical protein, predicted lipoprotein (part of ICE)
15MLC_2180281365..284100 [+], 2736Hypothetical protein, predicted transmembrane protein (part of ICE)
16MLC_2190284470..284850 [+], 381CDS15, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
17MLC_2200284854..286773 [+], 1920CDS16, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
18MLC_2210286798..289641 [+], 2844CDS17, TraE/VirB4 family NTPase (part of ICE)
19MLC_2220289654..290319 [+], 666CDS18, conserved hypothetical protein (part of ICE)
20MLC_2230290321..295324 [+], 5004CDS19, conserved hypothetical protein, predicted transmembrane protein (part of ICE)
21MLC_2240295785..296723 [+], 939Hypothetical protein (part of ICE)
22MLC_2250297026..297649 [+], 624Conserved hypothetical protein (part of ICE)
23MLC_2260297965..298330 [+], 366Conserved hypothetical protein (part of ICE)
24MLC_2270298554..299468 [+], 915CDSG, Soj/ParA family protein (part of ICE)
25MLC_2280299518..300750 [+], 1233CDS22, conserved hypothetical protein (part of ICE)
 
flank Flanking regions
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins21Fasta
(1) Thiaucourt F; Manso-Silvan L; Salah W; Barbe V; Vacherie B; Jacob D; Breton M; Dupuy V; Lomenech AM; Blanchard A; Sirand-Pugnet P (2011). Mycoplasma mycoides, from "mycoides Small Colony" to "capri". A microevolutionary perspective. BMC Genomics. 0.579166667. [PudMed:21324191]