ICEberg
I. Information of ICE
ICEberg ID231
Name Sp23F_PPI-1 This is a predicted ICE derived from literature
FamilyPPI-1
OrganismStreptococcus pneumoniae ATCC 700669
Size (bp)28594
GC content [Genome] (%)31.96[39.49]
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceFM211187 (complete ICE sequence in this genome)
Replicon chromosome (2221315 bp, BioProject:31233) [NC_011900]
Genome coordinates922465..951058 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of Sp23F_PPI-1 is not available.



The graph information of Sp23F_PPI-1 components from FM211187
Complete gene list of Sp23F_PPI-1 from FM211187
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SPN23F09480917925..918899 [+], 975conserved hypothetical protein
2SPN23F09490918899..919513 [+], 615putative membrane protein
3SPN23F09500919587..920561 [+], 975putative exported protein
4SPN23F09510920635..922266 [+], 1632putative RNA methyltransferase
5SPN23F09511922465..922758 [+], 294conserved hypothetical protein
6SPN23F09520923004..923222 [+], 219putative regulatory protein
7SPN23F09530923615..924640 [+], 1026putative iron-siderophore binding lipoprotein
8SPN23F09540924630..925637 [+], 1008ferric siderophore ABC transporter, permease protein
9SPN23F09550925637..926644 [+], 1008ferric enterobactin transport protein
10SPN23F09560926644..927438 [+], 795ferric siderophore ABC transporter, ATP-binding protein
11SPN23F09561927603..927860 [+], 258putative transposase (fragment)
12SPN23F09562928006..928215 [+], 210putative uncharacterized protein
13SPN23F09570928340..928495 [+], 156putative uncharacterized protein
14SPN23F09571928674..928817 [+], 144putative uncharacterized protein
15SPN23F09580929179..929340 [+], 162conserved hypothetical protein
16SPN23F09590929525..931111 [+], 1587putative site-specific recombinase (pseudogene)
17SPN23F09610931379..931945 [+], 567putative uncharacterized protein
18SPN23F09620932267..932455 [+], 189putative uncharacterized protein
19SPN23F09630932517..933332 [+], 816putative uncharacterized protein
20SPN23F09640933332..934186 [+], 855putative hydrolase
21SPN23F09650934298..935182 [+], 885conserved hypothetical protein
22SPN23F09660935345..937084 [+], 1740alpha-amylase
23SPN23F09670937170..937487 [+], 318conserved hypothetical protein
24SPN23F09700938259..938735 [+], 477putative epsilon antitoxin
25SPN23F09710938735..939496 [+], 762putative zeta-toxin
26SPN23F09720939524..940680 [+], 1157putative uncharacterized protein (pseudogene)
27SPN23F09731941158..941352 [+], 195putative uncharacterized protein
28SPN23F09740941512..941871 [+], 360Tn5252, orf 10 protein
29SPN23F09750941881..942210 [+], 330Tn5252, orf 9 protein
30SPN23F09780942233..944118 [+], 1886Tn5252 relaxase
31SPN23F09790944159..945010 [-], 852putative regulatory protein
32SPN23F09800945149..945781 [+], 633putative lantibiotic modifying enzyme (pseudogene)
33SPN23F09810945774..947897 [+], 2124putative lantibiotic export protein
34SPN23F09820947910..948080 [+], 171putative uncharacterized protein
35SPN23F09830948114..948842 [+], 729putative lantibiotic transport ATP-binding protein
36SPN23F09840948835..949572 [+], 738putative membrane protein
37SPN23F09850949585..950295 [+], 711putative membrane protein
38SPN23F09860950837..951058 [+], 222putative DNA_binding protein
39SPN23F09871951607..951813 [+], 207putative transposase (pseudogene)
40ftsW951956..953185 [+], 1230putative cell division protein
41ppc953205..955901 [+], 2697putative phosphoenolpyruvate carboxylase
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins29Fasta
(1) Croucher NJ; Walker D; Romero P; Lennard N; Paterson GK; Bason NC; Mitchell AM; Quail MA; Andrew PW; Parkhill J; Bentley SD; Mitchell TJ (2009). Role of conjugative elements in the evolution of the multidrug-resistant pandemic clone Streptococcus pneumoniaeSpain23F ST81. J Bacteriol. 191(5):1480-9. [PudMed:19114491]
(2) Brown JS; Gilliland SM; Spratt BG; Holden DW (2004). A locus contained within a variable region of pneumococcal pathogenicity island 1 contributes to virulence in mice. Infect Immun. 72(3):1587-93. [PudMed:14977965] experimental
 
experimental experimental literature