ICEberg
I. Information of ICE
ICEberg ID224
Name Tn5801 This ICE is derived from experimental literature
FamilyTn5801
OrganismStaphylococcus aureus subsp. aureus Mu50
Size (bp)25618
GC content [Genome] (%)35.39[32.88]
Insertion siteGMP-synthase gene (SAV0391)
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceBA000017 (complete ICE sequence in this genome)
Replicon chromosome (2878529 bp, BioProject:263) [NC_002758]
Genome coordinates436064..461681 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of Tn5801 is not available.



The graph information of Tn5801 components from BA000017
Complete gene list of Tn5801 from BA000017
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1xprT431087..431665 [+], 579xanthine phosphoribosyltransferase
2pbuX431665..432933 [+], 1269xanthine permease
3guaB432971..434437 [+], 1467inositol-monophosphate dehydrogenase
4guaA434462..436003 [+], 1542GMP synthase
5int436071..437264 [-], 1194integrase homologIntegrase 
6SAV0393437291..437491 [-], 201hypothetical protein
7SAV0394437989..438219 [-], 231conserved hypothetical protein
8SAV0395438216..438698 [-], 483hypothetical protein
9SAV0396438827..438937 [-], 111hypothetical protein
10SAV0397439169..439522 [+], 354putative transcriptional regulator
11tetM439865..441784 [-], 1920tetracycline resistance protein
12SAV0399442161..443123 [-], 963hypothetical proteinOrf13_Tn, T4SS component 
13SAV0400443107..444129 [-], 1023similar to lipoprotein, NLP/P60 familyOrf14_Tn, T4SS component 
14SAV0401444126..446153 [-], 2028putative membrane proteinOrf15_Tn, T4SS component 
15SAV0402446150..448603 [-], 2454hypothetical proteinOrf16_Tn, T4SS component 
16SAV0403448587..449024 [-], 438hypothetical proteinOrf17_Tn, T4SS component 
17SAV0404449054..449692 [-], 639hypothetical protein
18SAV0405449748..450248 [-], 501hypothetical protein
19SAV0406450309..451088 [-], 780hypothetical protein
20SAV0407451130..451351 [-], 222hypothetical proteinOrf19_Tn, T4SS component 
21SAV0408451634..452818 [-], 1185putative phage replication protein
22SAV0409453000..454403 [-], 1404similar to DNA translocase FtsKOrf21_Tn, T4SS component 
23SAV0410454425..455198 [-], 774hypothetical protein
24SAV0411455208..455585 [-], 378hypothetical protein
25SAV0412455606..455920 [-], 315hypothetical protein
26SAV0413456120..457913 [-], 1794hypothetical protein
27SAV0414457910..460099 [-], 2190hypothetical protein
28tnp460233..461423 [-], 1191transposase
29SAV0416461917..462453 [-], 537hypothetical protein
30SAV0417462845..463549 [-], 705hypothetical protein
31SAV0418463948..464244 [-], 297probable transposase
32SAV0419464481..464633 [-], 153hypothetical protein
33SAV0420465165..465524 [-], 360conserved hypothetical protein
34SAV0421465543..466388 [-], 846putative nucleoside-diphosphate-sugar epimerase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins24Fasta
(1) Denapaite D; Bruckner R; Nuhn M; Reichmann P; Henrich B; Maurer P; Schahle Y; Selbmann P; Zimmermann W; Wambutt R; Hakenbeck R (2010). The genome of Streptococcus mitis B6--what is a commensal. PLoS One. 5(2):e9426. [PudMed:20195536]
(2) Kuroda M; Ohta T; Uchiyama I; Baba T; Yuzawa H; Kobayashi I; Cui L; Oguchi A; Aoki K; Nagai Y; Lian J; Ito T; Kanamori M; Matsumaru H; Maruyama A; Murakami H; Hosoyama A; Mizutani-Ui Y; Takahashi NK; Sawano T; Inoue R; Kaito C; Sekimizu K; Hirakawa H; Kuhara S; Goto S; Yabuzaki J; Kanehisa M; Yamashita A; Oshima K; Furuya K; Yoshino C; Shiba T; Hattori M; Ogasawara N; Hayashi H; Hiramatsu K (2001). Whole genome sequencing of meticillin-resistant Staphylococcus aureus. Lancet. 357(9264):1225-40. [PudMed:11418146]