ICEberg
I. Information of ICE
ICEberg ID212
Name AICESav3708 {AICE} This is a predicted ICE derived from literature
FamilyUnclassified
OrganismStreptomyces avermitilis MA-4680
Size (bp)23384
GC content [Genome] (%)66.98[70.72]
Insertion sitetRNA-Arg (SAV_t18)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceBA000030 (complete ICE sequence in this genome)
Replicon chromosome (9025608 bp, BioProject:189) [NC_003155]
Genome coordinates4589836..4613219 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of AICESav3708 {AICE} is not available.



The graph information of AICESav3708 {AICE} components from BA000030
Complete gene list of AICESav3708 {AICE} from BA000030
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1aco4585720..4587741 [+], 2022putative acyl-CoA oxidase
2adhA54588309..4589343 [+], 1035putative alcohol dehydrogenase
3int74590544..4591725 [-], 1182putative tyrosine-family recombinase/integraseIntegrase 
4xis4591725..4591925 [-], 201putative phage excisionase
5SAV_37104592037..4592204 [-], 168hypothetical protein
6SAV_37114592396..4593871 [-], 1476putative ATP-binding protein
7SAV_37124593874..4594734 [-], 861hypothetical proteinReplication protein 
8SAV_37134594875..4595906 [+], 1032hypothetical protein
9SAV_37144595934..4596389 [-], 456hypothetical protein
10traB14596559..4598637 [-], 2079putative sporulation-related proteinTranslocation protein 
11traA14598651..4599220 [-], 570putative sporulation-related protein
12SAV_37174599240..4599740 [-], 501hypothetical protein
13SAV_37184599769..4600851 [-], 1083hypothetical protein
14SAV_37194600848..4601825 [-], 978hypothetical protein
15SAV_37204601822..4602112 [-], 291hypothetical protein
16SAV_37214602727..4603485 [+], 759putative GntR-family transcriptional regulator
17SAV_37224605804..4607084 [+], 1281putative IS701 family ISAzvi8-like transposase
18SAV_37234607342..4608352 [-], 1011hypothetical protein
19SAV_37244608844..4609239 [-], 396hypothetical protein
20SAV_37254609420..4610523 [-], 1104hypothetical protein
21SAV_37264610608..4612356 [-], 1749hypothetical protein
22SAV_37274612749..4613219 [-], 471hypothetical protein
23int84614801..4615940 [-], 1140putative tyrosine-family recombinase/integraseIntegrase 
24repSA14616145..4617458 [-], 1314putative replication initiation proteinReplication protein 
25spdD14617607..4617852 [-], 246putative SpdD protein
26SAV_37314617877..4618071 [-], 195hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins20Fasta
(1) Ghinet MG; Bordeleau E; Beaudin J; Brzezinski R; Roy S; Burrus V (2011). Uncovering the prevalence and diversity of integrating conjugative elements in actinobacteria. PLoS One. 6(11):e27846. [PudMed:22114709] in_silico
(2) te Poele EM; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative elements. Antonie Van Leeuwenhoek. 94(1):127-43. [PudMed:18523858]
 
in_silico in silico analysis literature