ICEberg
I. Information of ICE
ICEberg ID19
Name ICEVchInd2 This ICE is derived from experimental literature
FamilySXT/R391
OrganismVibrio cholerae O1
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionTrimethoprim-sulfamethoxazole resistence
Species that ICE can be transferred to-
Nucleotide SequenceEF434309; EF434284 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEVchInd2 is not available.



The graph information of ICEVchInd2 components from EF434284
Incomplete gene list of ICEVchInd2 from EF434284
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1traG1..144 [+], 144TraGTraG_F, T4SS component 


The graph information of ICEVchInd2 components from EF434309
Incomplete gene list of ICEVchInd2 from EF434309
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1eexR11..432 [+], 432EexR1
 
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Marrero J; Waldor MK (2007). The SXT/R391 family of integrative conjugative elements is composed of two exclusion groups. J Bacteriol. 189(8):3302-5. [PudMed:17307849] experimental
 
experimental experimental literature