ICEberg
I. Information of ICE
ICEberg ID183
Name 2096-RD.2 This is a predicted ICE derived from literature
FamilyUnclassified
OrganismStreptococcus pyogenes MGAS2096
Size (bp)62402
GC content [Genome] (%)43.2[38.73]
Insertion site-
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceCP000261 (complete ICE sequence in this genome)
Replicon chromosome (1860355 bp, BioProject:16365) [NC_008023]
Genome coordinates1057904..1120305 
Putative oriT region -
Putative relaxase coordinates: 1096375..1097340; Locus tag: MGAS2096_Spy1143;  Family:  MOBV


II. ICE interaction with IME/CIME/

The interaction information of 2096-RD.2 is not available.



The graph information of 2096-RD.2 components from CP000261
Complete gene list of 2096-RD.2 from CP000261
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1MGAS2096_Spy10951052922..1053287 [+], 366hypothetical protein
2MGAS2096_Spy10961053407..1054096 [-], 690Transporter, MFS superfamily
3MGAS2096_Spy10971054144..1054494 [-], 351Transporter, MFS superfamily
4MGAS2096_Spy10981054412..1054627 [-], 216Transporter, MFS superfamily
5MGAS2096_Spy10991054929..1056485 [+], 1557hypothetical cytosolic protein
6MGAS2096_Spy11001056590..1056991 [-], 402Thioesterase superfamily protein
7MGAS2096_Spy11011057076..1057315 [-], 240Phosphorylase, Pnp/Udp family
8MGAS2096_Spy11021057387..1057587 [-], 201Phosphorylase, Pnp/Udp family
9MGAS2096_Spy11031057904..1059685 [-], 1782Site-specific recombinaseIntegrase 
10MGAS2096_Spy11041059868..1060245 [-], 378MazF protein
11MGAS2096_Spy11051060848..1061333 [-], 486RNA polymerase ECF-type sigma factor
12MGAS2096_Spy11061061809..1061979 [-], 171hypothetical protein
13MGAS2096_Spy11071062074..1063105 [-], 1032two-component system histidine kinase
14MGAS2096_Spy11081063102..1063344 [-], 243Two-component response regulator
15MGAS2096_Spy11091063344..1063823 [-], 480Two-component response regulator
16MGAS2096_Spy11101063849..1066446 [-], 2598ABC transporter permease protein
17MGAS2096_Spy11111066400..1067086 [-], 687ABC transporter ATP-binding protein
18MGAS2096_Spy11121067207..1067737 [-], 531Transcriptional regulator
19MGAS2096_Spy11131067839..1069257 [+], 1419Na+ driven multidrug efflux pump
20MGAS2096_Spy11141069312..1069497 [-], 186hypothetical protein
21MGAS2096_Spy11151069501..1070259 [-], 759Ferredoxin
22MGAS2096_Spy11161070268..1070864 [-], 597Transcriptional regulator, TetR family
23MGAS2096_Spy11171070986..1071693 [-], 708hypothetical protein
24MGAS2096_Spy11181071696..1072328 [-], 633Virginiamycin A acetyltransferase
25MGAS2096_Spy11191072455..1072748 [-], 294hypothetical protein
26MGAS2096_Spy11201073071..1073430 [+], 360Transcriptional regulator, MerR family
27MGAS2096_Spy11211073455..1075233 [-], 1779antigen-like proteinYddH, T4SS component 
28MGAS2096_Spy11221075269..1076054 [-], 786Sortase B family protein
29MGAS2096_Spy11231076122..1076526 [-], 405hypothetical protein
30MGAS2096_Spy11241076507..1077358 [-], 852Adenine-specific methyltransferase
31MGAS2096_Spy11251077345..1079774 [-], 2430TRSE proteinPrgJ, T4SS component 
32MGAS2096_Spy11261080101..1080364 [-], 264hypothetical protein
33MGAS2096_Spy11271080367..1081218 [-], 852hypothetical protein
34MGAS2096_Spy11281081209..1081835 [-], 627Adenine-specific methyltransferase
35MGAS2096_Spy11291081864..1082235 [-], 372Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A
36MGAS2096_Spy11301082250..1084043 [-], 1794TraG/TraD familyT4CP 
37MGAS2096_Spy11311084243..1085103 [-], 861hypothetical protein
38MGAS2096_Spy11321085103..1085921 [-], 819hypothetical protein
39MGAS2096_Spy11331085863..1087338 [-], 1476Relaxase
40MGAS2096_Spy11341087275..1087607 [-], 333Relaxosome component
41MGAS2096_Spy11351088210..1089199 [-], 990LtrC
42MGAS2096_Spy11361089279..1090217 [-], 939hypothetical protein
43MGAS2096_Spy11371090355..1091569 [-], 1215hypothetical protein
44MGAS2096_Spy11381091687..1092016 [-], 330hypothetical protein
45MGAS2096_Spy11391092092..1093030 [-], 939Superfamily II DNA and RNA helicase
46MGAS2096_Spy11401092958..1094889 [-], 1932Site-specific recombinase
47MGAS2096_Spy11411095206..1095436 [-], 231hypothetical cytosolic protein
48MGAS2096_Spy11421095513..1096367 [-], 855Chromosome partitioning protein parB
49MGAS2096_Spy11431096375..1097340 [-], 966Plasmid recombination protein, Mob familyRelaxase, MOBV Family
50MGAS2096_Spy11441097818..1098813 [-], 996hypothetical protein
51MGAS2096_Spy11451098968..1099489 [-], 522RNA polymerase ECF-type sigma factor
52MGAS2096_Spy11461099518..1099949 [-], 432hypothetical cytosolic protein
53MGAS2096_Spy11471100044..1100619 [-], 576RNA polymerase sigma-B factor
54MGAS2096_Spy11481101044..1101217 [-], 174hypothetical protein
55MGAS2096_Spy11491101269..1103188 [-], 1920Tetracycline resistance protein tetM
56MGAS2096_Spy11501103555..1103929 [-], 375TnpV
57MGAS2096_Spy11511103910..1111160 [-], 7251Superfamily II DNA and RNA helicase
58MGAS2096_Spy11521111195..1111419 [-], 225hypothetical protein
59MGAS2096_Spy11541111635..1112330 [-], 696hypothetical protein
60MGAS2096_Spy11531112290..1113006 [+], 717hypothetical protein
61MGAS2096_Spy11551113060..1113332 [-], 273hypothetical membrane associated protein
62MGAS2096_Spy11561113797..1117945 [-], 4149Collagen adhesion protein
63MGAS2096_Spy11571118131..1119096 [-], 966Chromosome partitioning protein parB
64MGAS2096_Spy11581119020..1119847 [-], 828Chromosome partitioning protein parA
65MGAS2096_Spy11591119967..1120305 [-], 339hypothetical protein
66MGAS2096_Spy11601120818..1122212 [-], 139523S rRNA m(5)U 1939 methyltransferase
67MGAS2096_Spy11611122363..1123712 [-], 1350Transcriptional regulator, LytR family
68aroK1123920..1124411 [-], 492Shikimate kinase
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins57Fasta
(1) Beres SB; Musser JM (2007). Contribution of exogenous genetic elements to the group A Streptococcus metagenome. PLoS One. 2(8):e800. [PudMed:17726530]