ICEberg
I. Information of ICE
ICEberg ID172
Name Tn1207.3 This ICE is derived from experimental literature
FamilyTn1207.3
OrganismStreptococcus pyogenes 2812A
Size (bp)52491
GC content [Genome] (%)39.15
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAY657002 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..52491 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of Tn1207.3 is not available.



The graph information of Tn1207.3 components from AY657002
Complete gene list of Tn1207.3 from AY657002
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1-113..769 [+], 657unknown
2-898..2010 [+], 1113site-specific recombinase
3-2025..2441 [+], 417unknown
4mef(A)3271..4488 [+], 1218Mef(A)AR 
5mat(A)4608..6071 [+], 1464Mat(A)
6-6189..6488 [-], 300unknown
7-6475..6843 [-], 369unknown
8-6840..8255 [-], 1416UmuC/MucB-like protein
9-8260..8400 [-], 141unknown
10-8378..8605 [-], 228unknown
11-8608..9297 [-], 690UmuD/MucA-like protein
12-9411..10637 [-], 1227methylase
13-10670..12337 [+], 1668restriction endonuclease
14-12351..13598 [+], 1248restriction endonuclease
15-13620..14774 [-], 1155unknown
16-15120..15689 [+], 570unknown
17-15728..17683 [-], 1956DNA polymerase
18-17732..17899 [-], 168unknown
19-17918..18490 [-], 573unknown
20-18471..19592 [-], 1122unknown
21-19585..19908 [-], 324unknown
22-19883..20017 [-], 135unknown
23-20295..22580 [+], 2286ATPase
24-22844..23146 [+], 303unknown
25-23127..24503 [+], 1377helicase
26-24496..24999 [+], 504unknown
27-25185..25412 [+], 228unknown
28-25468..25683 [+], 216unknown
29-25707..26768 [+], 1062S-adenosylmethionine synthetase
30-26770..27135 [+], 366holin-like protein
31-27383..27787 [+], 405unknown
32-27802..29034 [+], 1233methylase
33-29031..30197 [+], 1167methylase
34-30313..30573 [+], 261unknown
35-30578..30676 [+], 99unknown
36-30686..30802 [+], 117unknown
37-30957..31103 [+], 147unknown
38-31186..31662 [+], 477phage terminase small subunit
39-31664..33256 [+], 1593phage terminase large subunit
40-33268..34509 [+], 1242phage portal protein
41-34502..35188 [+], 687protease
42-35204..36391 [+], 1188phage major capsid protein
43-36455..36658 [+], 204unknown
44-36659..36988 [+], 330phage head tail adaptor
45-36964..37344 [+], 381unknown
46-37341..37658 [+], 318unknown
47-37671..38261 [+], 591unknown
48-38258..38677 [+], 420unknown
49-38686..38838 [+], 153unknown
50-38856..41975 [+], 3120unknown
51-41972..42697 [+], 726unknown
52-42682..45585 [+], 2904unknown
53-45598..47880 [+], 2283unknown
54-47864..48646 [+], 783lysin
55-48752..48913 [+], 162unknown
56-48971..50209 [+], 1239site-specific recombinase
57-50206..51771 [+], 1566site-specific recombinaseIntegrase 
58-51827..52402 [+], 576unknown
 
integrase Gene may contribute to site-specific recombination
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins58Fasta
(1) Santagati M; Iannelli F; Cascone C; Campanile F; Oggioni MR; Stefani S; Pozzi G (2003). The novel conjugative transposon tn1207.3 carries the macrolide efflux gene mef(A) in Streptococcus pyogenes. Microb Drug Resist. 9(3):243-7. [PudMed:12959402] experimental
 
experimental experimental literature