ICEberg
I. Information of ICE
ICEberg ID156
Name pSE102 {AICE} This is a predicted ICE derived from literature
FamilyUnclassified
OrganismSaccharopolyspora erythraea NRRL 2338
Size (bp)11667
GC content [Genome] (%)67.17[71.15]
Insertion sitetRNA-Ser
FunctionAminoglycoside resistance
Species that ICE can be transferred to-
Nucleotide SequenceAM420293 (complete ICE sequence in this genome)
Replicon chromosome (8212805 bp, BioProject:18489) [NC_009142]
Genome coordinates273573..285239 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of pSE102 {AICE} is not available.



The graph information of pSE102 {AICE} components from AM420293
Complete gene list of pSE102 {AICE} from AM420293
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SACE_0233268605..269072 [+], 468CMP/dCMP deaminase, zinc-binding
2SACE_0234269255..269797 [+], 543RNA polymerase sigma-70 factor, ECF family
3SACE_0235270196..272004 [+], 1809putative large secreted protein
4SACE_0236272048..272542 [-], 495hypothetical protein
5SACE_0237272539..273294 [-], 756glycerophosphoryl diester phosphodiesterase
6int274405..275724 [-], 1320integrase (recombinase)Integrase 
7SACE_0240276265..276591 [-], 327hypothetical protein
8SACE_0240a276588..277157 [-], 570-
9SACE_0241277154..277384 [-], 231hypothetical protein
10SACE_0242277667..279133 [-], 1467hypothetical protein
11SACE_0244280123..280464 [-], 342hypothetical protein
12SACE_0245280464..280841 [-], 378hypothetical protein
13SACE_0246280845..281246 [-], 402hypothetical protein
14SACE_0247281249..281494 [-], 246hypothetical protein
15SACE_0248282076..282255 [-], 180hypothetical protein
16SACE_0250283817..284437 [-], 621aminoglycoside phosphotransferase
17SACE_0251285672..288122 [+], 2451putative DNA polymerase III gamma subunit
18SACE_0252288163..288393 [+], 231hypothetical protein
19SACE_0253288411..290231 [-], 1821peptidase S9, prolyl oligopeptidase active site region
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins11Fasta
(1) te Poele EM; Samborskyy M; Oliynyk M; Leadlay PF; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative pMEA-like elements of Amycolatopsis and Saccharopolyspora decoded. Plasmid. 59(3):202-16. [PudMed:18295883] in_silico
 
in_silico in silico analysis literature