ICEberg
I. Information of ICE
ICEberg ID155
Name ICESauJKD6008-1 This is a putative ICE identified in this study by Blast
FamilyICE6013
OrganismStaphylococcus aureus subsp. aureus str. JKD6008
Size (bp)19915
GC content [Genome] (%)29.6[32.89]
Insertion site-
Function-
Species that ICE can be transferred toStaphylococcus aureus
Nucleotide SequenceCP002120 (complete ICE sequence in this genome)
Replicon-
Genome coordinates2755273..2775187 
Putative oriT region -
Putative relaxase coordinates: 2772798..2773823; Locus tag: SAA6008_02640;  Family:  MOBT


II. ICE interaction with IME/CIME/

The interaction information of ICESauJKD6008-1 is not available.



The graph information of ICESauJKD6008-1 components from CP002120
Complete gene list of ICESauJKD6008-1 from CP002120
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1SAA6008_026192750691..2751521 [+], 831putative hydrolase/acyltransferase
2SAA6008_026202751668..2752558 [-], 891cobalamin synthesis related protein, CobW
3SAA6008_026212752658..2753998 [-], 1341FeoB family ferrous iron (Fe2+) uptake protein
4SAA6008_026222753992..2755098 [-], 1107FAD-dependent pyridine nucleotide-disulfide oxidoreductase
5SAA6008_026242756130..2756945 [-], 816putative ATPase/transposase
6SAA6008_026252756938..2758380 [-], 1443transposase for transposon Tn552Integrase 
7binL2758352..2758945 [-], 594Resolvase, N-terminal domain protein
8SAA6008_026272759207..2759587 [-], 381transcriptional repressor
9blaR12759577..2761334 [-], 1758beta-lactamase regulatory protein
10blaZ2761441..2762286 [+], 846beta-lactamase precursor, BlaZ
11SAA6008_026312763183..2763539 [-], 357conserved hypothetical protein
12SAA6008_026322763595..2764185 [-], 591conserved hypothetical protein, transposon-related protein
13SAA6008_026332764192..2765238 [-], 1047putative traG membrane proteinPrgK, T4SS component 
14SAA6008_026342765228..2767075 [-], 1848conserved membrane proteinYddG, T4SS component 
15SAA6008_026352767080..2768432 [-], 1353FtsK/SpoIIIE family cell division proteinYdcQ, T4SS component 
16SAA6008_026362768492..2770987 [-], 2496conserved hypothetical proteinYddE, T4SS component 
17SAA6008_026372771022..2771405 [-], 384conserved hypothetical protein, transposon-related proteinYddD, T4SS component 
18SAA6008_026382771417..2771677 [-], 261conserved hypothetical protein, transposon-related proteinYddC, T4SS component 
19SAA6008_026392771682..2772737 [-], 1056conserved hypothetical protein, transposon-related proteinYddB, T4SS component 
20SAA6008_026402772798..2773823 [-], 1026replication initiation factor family proteinRelaxase, MOBT Family
21SAA6008_026412774064..2774366 [-], 303conserved hypothetical protein, transposon-related protein
22SAA6008_026422774380..2774700 [-], 321conserved hypothetical protein, transposon-related protein
23SAA6008_026432774851..2774991 [-], 141conserved hypothetical protein
24SAA6008_026442775349..2775645 [-], 297conserved hypothetical protein
25SAA6008_026452775633..2775971 [-], 339conserved cytoplasmic protein
26SAA6008_026462776016..2776294 [-], 279conserved hypothetical protein
27SAA6008_026472776631..2777497 [-], 867fructosamine kinase
28pyrD2777715..2778779 [+], 1065putative dihydroorotate dehydrogenase
29SAA6008_026492778934..2779209 [+], 276conserved hypothetical protein
30SAA6008_026502779395..2780117 [-], 723conserved hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins19Fasta
Identified as part of this study from CP002120