ICEberg
I. Information of ICE
ICEberg ID142
Name R392 This ICE is derived from experimental literature
FamilySXT/R391
OrganismProvidencia rettgeri
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
FunctionKanamycin resistance
Species that ICE can be transferred to-
Nucleotide SequenceAJ634264 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of R392 is not available.



The graph information of R392 components from AJ634264
Incomplete gene list of R392 from AJ634264
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1int1..1242 [+], 1242putative integraseIntegrase 
 
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins1Fasta
(1) McGrath BM; O'Halloran JA; Pembroke JT (2005). Pre-exposure to UV irradiation increases the transfer frequency of the IncJ conjugative transposon-like elements R391, R392, R705, R706, R997 and pMERPH and is recA+ dependent. FEMS Microbiol Lett. 243(2):461-5. [PudMed:15686850] experimental
(2) McGrath BM; Pembroke JT (2004). Detailed analysis of the insertion site of the mobile elements R997, pMERPH, R392, R705 and R391 in E. coli K12. FEMS Microbiol Lett. 237(1):19-26. [PudMed:15268933] experimental
(3) Coetzee JN; Datta N; Hedges RW (1972). R factors from Proteus rettgeri. J Gen Microbiol. 72(3):543-52. [PudMed:4564689] experimental
 
experimental experimental literature