ICEberg
I. Information of ICE
ICEberg ID136
Name ICEVchLao1 This ICE is derived from experimental literature
FamilySXT/R391
OrganismVibrio cholerae 00LA1
Size (bp)-
GC content [Genome] (%)-
Insertion siteprfC
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAB115497; AB185252; AB186353 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEVchLao1 is not available.



The graph information of ICEVchLao1 components from AB115497
Incomplete gene list of ICEVchLao1 from AB115497
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1orf1807..2684 [+], 1878putative exonuclease
2orf22966..4573 [+], 1608putative helicase


The graph information of ICEVchLao1 components from AB185252
Incomplete gene list of ICEVchLao1 from AB185252
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1-119..358 [+], 240hypothetical protein
2-372..959 [+], 588hypothetical protein


The graph information of ICEVchLao1 components from AB186353
Incomplete gene list of ICEVchLao1 from AB186353
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1-156..1094 [-], 939hypothetical protein
2-1087..1920 [-], 834hypothetical protein
 

ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Iwanaga M; Toma C; Miyazato T; Insisiengmay S; Nakasone N; Ehara M (2004). Antibiotic resistance conferred by a class I integron and SXT constin in Vibrio cholerae O1 strains isolated in Laos. Antimicrob Agents Chemother. 48(7):2364-9. [PudMed:15215082] experimental
 
experimental experimental literature