ICEberg
I. Information of ICE
ICEberg ID127
Name ICEKpn342-1 This is a putative ICE identified in this study by Blast
FamilyUnclassified
OrganismKlebsiella pneumoniae 342
Size (bp)70230
GC content [Genome] (%)49.54[57.29]
Insertion sitetRNA-asn(KPK_1812)
FunctionPutrescine synthesis and polyamines metabolism
Species that ICE can be transferred to-
Nucleotide SequenceCP000964 (complete ICE sequence in this genome)
Replicon chromosome (5641239 bp, BioProject:28471) [NC_011283]
Genome coordinates1810666..1880895 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEKpn342-1 is not available.



The graph information of ICEKpn342-1 components from CP000964
Complete gene list of ICEKpn342-1 from CP000964
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1KPK_17481806792..1807769 [-], 978quinone oxidoreductase, YhdH family
2KPK_17491807766..1808473 [-], 708transcriptional regulator, TetR family
3KPK_17501809030..1810664 [+], 1635Na+/H+ antiporter
4KPK_17521812100..1813017 [+], 918putative cysteine synthase B
5KPK_17531813010..1813438 [+], 429conserved hypothetical protein
6KPK_17541813498..1813788 [+], 291thiS family protein
7KPK_17551813785..1814960 [+], 1176putative thiazole biosynthesis adenylyltransferase ThiF/rhodanese domain protein
8KPK_17561814998..1815942 [+], 945conserved hypothetical protein
9KPK_17571815929..1817419 [+], 1491cysteine desulfurase, SufS family
10KPK_17581817656..1822089 [-], 4434hypothetical protein
11KPK_17591822758..1824380 [+], 1623hypothetical protein
12KPK_17601824430..1826628 [+], 2199putative helicase
13KPK_17611826914..1827858 [+], 945putative antirestriction protein
14KPK_17621828278..1829189 [-], 912hypothetical protein
15KPK_17631829309..1829989 [-], 681hypothetical protein
16KPK_17641830383..1831324 [-], 942conserved hypothetical protein
17KPK_17651831716..1831844 [-], 129hypothetical protein
18KPK_17661832136..1833110 [-], 975oxidoreductase, zinc-binding dehydrogenase family
19KPK_17671833218..1834075 [+], 858transcriptional regulator, LysR family
20KPK_17681834119..1835135 [-], 1017site-specific recombinase, phage integrase familyIntegrase 
21KPK_17691835128..1836054 [-], 927site-specific recombinase, phage integrase family
22KPK_17701836051..1836998 [-], 948site-specific recombinase, phage integrase family
23KPK_17711837137..1838030 [-], 894DNA methylase
24KPK_17721838023..1838826 [-], 804putative mobC protein
25KPK_17731838835..1840571 [-], 1737type IV conjugative transfer system coupling protein TraDVirD4, T4SS component 
26KPK_17741841340..1841642 [-], 303putative lipoprotein
27virB111841703..1842722 [-], 1020P-type DNA transfer ATPase VirB11VirB11, T4SS component 
28KPK_17761842712..1844019 [-], 1308bacterial conjugation TrbI-like proteinVirB10, T4SS component 
29virB91844016..1844906 [-], 891P-type conjugative transfer protein VirB9VirB9, T4SS component 
30virB81844903..1845586 [-], 684type IV secretion system protein VirB8VirB8, T4SS component 
31KPK_17791845579..1845719 [-], 141putative conjugal transfer proteinVirB7, T4SS component 
32KPK_17801845809..1846828 [-], 1020TrbL/VirB6 plasmid conjugal transfer proteinVirB6, T4SS component 
33KPK_17811846900..1847175 [-], 276putative lipoprotein
34KPK_17821847187..1847915 [-], 729type IV secretion system proteinVirB5, T4SS component 
35KPK_17831847938..1850685 [-], 2748type IV secretion/conjugal transfer ATPase, VirB4 familyVirB4, T4SS component 
36KPK_17841850697..1850969 [-], 273putative type IV secretion system proteinVirB2, T4SS component 
37KPK_17851850972..1851616 [-], 645transglycosylase SLT domain proteinVirB1, T4SS component 
38KPK_17861851688..1851909 [-], 222conserved hypothetical protein
39KPK_17871852304..1852513 [-], 210phage/conjugal plasmid C-4 type zinc finger protein, TraR family
40KPK_17881852503..1853090 [-], 588conserved hypothetical protein
41KPK_17891853144..1853353 [-], 210transcriptional regulator, AlpA family
42KPK_17901853686..1854603 [-], 918conserved hypothetical protein
43KPK_17911854863..1856047 [-], 1185transporter, major facilitator family
44KPK_17921856044..1857279 [-], 1236conserved hypothetical protein
45KPK_17931857329..1858684 [-], 1356oxidase, FAD-binding
46KPK_17941858730..1859782 [-], 1053hypothetical protein
47KPK_17951859791..1860528 [-], 738threonyl and alanyl tRNA synthetase domain protein
48KPK_17961860585..1861637 [-], 1053putative histidinol-phosphate aminotransferase
49KPK_17971861634..1863217 [-], 1584putative histidine ammonia-lyase
50KPK_17981863244..1864251 [-], 1008conserved hypothetical protein
51KPK_17991864670..1865920 [-], 1251integrase
52KPK_18001866564..1867484 [+], 921transcriptional regulator, LysR family
53KPK_18011867529..1869019 [-], 1491putative gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase
54alkJ1869012..1870658 [-], 1647alcohol dehydrogenase (acceptor)
55KPK_18031870673..1872076 [-], 1404permease, cytosine/purine, uracil, thiamine, allantoin family
56KPK_18041872685..1873953 [+], 1269conserved hypothetical protein
57KPK_18051873963..1874388 [+], 426endoribonuclease L-PSP family protein
58KPK_18061874385..1875059 [+], 675conserved hypothetical protein
59KPK_18071875052..1876212 [+], 1161putative acetylornithine deacetylase
60KPK_18091877500..1877697 [+], 198hypothetical protein
61KPK_18111879467..1880735 [-], 1269integrase
62nac1881303..1882220 [+], 918nitrogen assimilation regulatory protein Nac
63cbl1882327..1883277 [+], 951transcriptional regulator Cbl
64KPK_18151883361..1884296 [+], 936ErfK/YbiS/YcfS/YnhG family protein
65KPK_18161884495..1884731 [-], 237hypothetical protein
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins58Fasta
(1) Zhang J; van Aartsen JJ; Jiang X; Shao Y; Tai C; He X; Tan Z; Deng Z; Jia S; Rajakumar K; Ou HY (2011). Expansion of the known Klebsiella pneumoniae species gene pool by characterization of novel alien DNA islands integrated into tmRNA gene sites. J Microbiol Methods. 84(2):283-9. [PudMed:21182879] experimental
(2) Identified as part of this study from CP000964
 
experimental experimental literature