ICEberg
I. Information of ICE
ICEberg ID125
Name CW459tet(M) This ICE is derived from experimental literature
FamilyTn916
OrganismClostridium perfringens CW459
Size (bp)-
GC content [Genome] (%)-
Insertion sitegene encoding a GMP-synthase
FunctionTetracycline resistance
Species that ICE can be transferred to-
Nucleotide SequenceAF329848 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of CW459tet(M) is not available.



The graph information of CW459tet(M) components from AF329848
Incomplete gene list of CW459tet(M) from AF329848
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1orf151..566 [+], 566ORF15Orf15_Tn, T4SS component 
2orf14563..1585 [+], 1023ORF14Orf14_Tn, T4SS component 
3orf131593..2531 [+], 939ORF13Orf13_Tn, T4SS component 
4tet(M)2753..4672 [+], 1920Tet(M)AR 
5orf64770..4958 [+], 189ORF6
6orf95018..5371 [-], 354ORF9
7orf105603..5713 [+], 111ORF10
8orf75902..6324 [+], 423ORF7
9orf86321..6551 [+], 231ORF8
10int4597276..8469 [+], 1194Int459Integrase 
11gmp4598537..8691 [-], 155GMP459
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins11Fasta
(1) Roberts AP; Johanesen PA; Lyras D; Mullany P; Rood JI (2001). Comparison of Tn5397 from Clostridium difficile, Tn916 from Enterococcus faecalis and the CW459tet(M) element from Clostridium perfringens shows that they have similar conjugation regions but different insertion and excision modules. Microbiology. 147(Pt 5):1243-51. [PudMed:11320127] experimental
 
experimental experimental literature