ICEberg
I. Information of ICE
ICEberg ID124
Name pRS01 This ICE is derived from experimental literature
FamilyUnclassified
OrganismLactococcus lactis subsp. lactis ML3
Size (bp)-
GC content [Genome] (%)48.4
Insertion site-
Function-
Species that ICE can be transferred to-
Nucleotide SequenceU50902 (partial ICE sequence)
Putative oriT region -
Putative relaxase coordinates: 6742..10925; Locus tag: -;  Family:  MOBP


II. ICE interaction with IME/CIME/

The interaction information of pRS01 is not available.



The graph information of pRS01 components from U50902
Incomplete gene list of pRS01 from U50902
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1ltrM1386..3155 [+], 1770LtrM
2ltrC3207..4859 [+], 1653LtrC
3ltrD4932..5408 [+], 477LtrD
4ltrE5639..6343 [+], 705LtrE
5ltrF6386..6742 [+], 357LtrF
6ltrB6742..10925 [+], 4184relaxaseRelaxase, MOBP Family
7ltrA7795..9594 [+], 1800putative maturase
 
conjugation Gene may play role in conjugative transfer

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins7Fasta
(1) Belhocine K; Mandilaras V; Yeung B; Cousineau B (2007). Conjugative transfer of the Lactococcus lactis sex factor and pRS01 plasmid to Enterococcus faecalis. FEMS Microbiol Lett. 269(2):289-94. [PudMed:17263841] experimental
(2) Mills DA; McKay LL; Dunny GM (1996). Splicing of a group II intron involved in the conjugative transfer of pRS01 in lactococci. J Bacteriol. 178(12):3531-8. [PudMed:8655550] experimental
(3) Mills DA; Choi CK; Dunny GM; McKay LL (1994). Genetic analysis of regions of the Lactococcus lactis subsp. lactis plasmid pRS01 involved in conjugative transfer. Appl Environ Microbiol. 60(12):4413-20. [PudMed:7811081] experimental
 
experimental experimental literature