ICEberg
I. Information of ICE
ICEberg ID1108
Name ICEMlSym(NZP2037)-γ This ICE is derived from experimental literature
FamilyUnclassified
OrganismMesorhizobium loti NZP2037
Size (bp)6202
GC content [Genome] (%)-
Insertion site-
Functionγ region of the tripartite ICE
Species that ICE can be transferred to-
Nucleotide SequenceCP016079 (complete ICE sequence in this genome)
Replicon-
Genome coordinates2577929..2584131 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEMlSym(NZP2037)-γ is not available.



The graph information of ICEMlSym(NZP2037)-γ components from CP016079
Complete gene list of ICEMlSym(NZP2037)-γ from CP016079
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1A9174_125102573287..2575554 [-], 2268flagellar motor protein MotB
2A9174_125152575753..2576199 [+], 447hypothetical protein
3A9174_125202576306..2576791 [+], 486hypothetical protein
4A9174_125252577007..2577717 [-], 711hypothetical protein
5A9174_125352578055..2579239 [-], 1185integraseIntegrase 
6A9174_125402579244..2579465 [-], 222hypothetical protein
7A9174_125452579537..2579782 [-], 246hypothetical protein
8A9174_125502580345..2581331 [-], 987hypothetical protein
9A9174_125552581328..2582374 [-], 1047hypothetical protein
10A9174_125602582716..2583918 [-], 1203integraseIntegrase 
11A9174_125702584508..2585380 [-], 873AraC family transcriptional regulator
12A9174_125752585485..2586756 [+], 1272ABC transporter substrate-binding protein
13A9174_125802586852..2587712 [+], 861lactose ABC transporter permease
14A9174_125852587709..2588545 [+], 837ABC transporter permease
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins6Fasta
(1) Haskett TL; Ramsay JP; Bekuma AA; Sullivan JT; O'Hara GW; Terpolilli JJ (2017). Evolutionary persistence of tripartite integrative and conjugative elements. Plasmid. 92:30-36. [PudMed:28669811]
(2) Haskett TL; Terpolilli JJ; Bekuma A; O'Hara GW; Sullivan JT; Wang P; Ronson CW; Ramsay JP (2016). Assembly and transfer of tripartite integrative and conjugative genetic elements. Proc Natl Acad Sci U S A. 113(43):12268-12273. [PudMed:27733511]