ICEberg
I. Information of ICE
ICEberg ID1107
Name ICEMcSym(1284)-γ This is a predicted ICE derived from literature
FamilyUnclassified
OrganismMesorhizobium ciceri WSM1284
Size (bp)7760
GC content [Genome] (%)-
Insertion site-
Functionγ region of the tripartite ICE
Species that ICE can be transferred to-
Nucleotide SequenceCP015064 (complete ICE sequence in this genome)
Replicon-
Genome coordinates4618583..4626343 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEMcSym(1284)-γ is not available.



The graph information of ICEMcSym(1284)-γ components from CP015064
Complete gene list of ICEMcSym(1284)-γ from CP015064
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1A4R29_216454614038..4614874 [-], 837ABC transporter permease
2A4R29_216504614871..4615731 [-], 861lactose ABC transporter permease
3A4R29_216554615938..4617209 [-], 1272ABC transporter substrate-binding protein
4A4R29_216604617316..4618188 [+], 873AraC family transcriptional regulator
5A4R29_216704618795..4620060 [+], 1266integraseIntegrase 
6A4R29_216754620521..4621735 [+], 1215hypothetical protein
7A4R29_216804621732..4622178 [+], 447hypothetical protein
8A4R29_216854622175..4624034 [+], 1860hypothetical protein
9A4R29_216904624483..4624734 [+], 252hypothetical protein
10A4R29_216954624796..4625053 [+], 258hypothetical protein
11A4R29_217004625046..4626236 [+], 1191integraseIntegrase 
12A4R29_217104626554..4627267 [+], 714hypothetical protein
13A4R29_217154627478..4627834 [-], 357hypothetical protein
14A4R29_217204628091..4628537 [-], 447hypothetical protein
15A4R29_217254628735..4630963 [+], 2229flagellar motor protein MotB
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins7Fasta
(1) Haskett TL; Terpolilli JJ; Bekuma A; O'Hara GW; Sullivan JT; Wang P; Ronson CW; Ramsay JP (2016). Assembly and transfer of tripartite integrative and conjugative genetic elements. Proc Natl Acad Sci U S A. 113(43):12268-12273. [PudMed:27733511]