ICEberg
I. Information of ICE
ICEberg ID1103
Name ICEMlSym(NZP2037)-β This ICE is derived from experimental literature
FamilyUnclassified
OrganismMesorhizobium loti NZP2037
Size (bp)27584
GC content [Genome] (%)-
Insertion site-
Functionβ region of the tripartite ICE
Species that ICE can be transferred to-
Nucleotide SequenceCP016079 (complete ICE sequence in this genome)
Replicon-
Genome coordinates3031358..3058942 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEMlSym(NZP2037)-β is not available.



The graph information of ICEMlSym(NZP2037)-β components from CP016079
Complete gene list of ICEMlSym(NZP2037)-β from CP016079
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1A9174_144953026707..3027996 [+], 1290MFS transporter
2A9174_145003028072..3028524 [+], 453sensor histidine kinase
3A9174_145053028621..3029079 [+], 459phenylacetic acid degradation protein
4A9174_145103029079..3029744 [+], 6665'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
5A9174_145153029800..3031362 [+], 1563glutamine-hydrolyzing GMP synthase
6A9174_145203031679..3032932 [+], 1254integrase
7A9174_145253033680..3035020 [-], 1341transposase
8A9174_145303036063..3036407 [-], 345hypothetical protein
9A9174_145353036404..3037492 [-], 1089transposase
10A9174_145403037585..3037932 [+], 348hypothetical protein
11A9174_145453038215..3043782 [+], 5568helicase
12A9174_145553045710..3045943 [-], 234hypothetical protein
13A9174_145603045930..3046622 [-], 693hypothetical protein
14A9174_145653047370..3049055 [-], 1686tryptophan 2-monooxygenase
15A9174_145753050598..3051683 [-], 1086hemolysin secretion protein D
16A9174_145803053344..3053901 [-], 558hypothetical protein
17A9174_145903054935..3055354 [+], 420hypothetical protein
18A9174_145953056532..3057626 [-], 1095transposase
19A9174_146003057729..3058637 [-], 909integraseIntegrase 
20A9174_146053059573..3059893 [-], 321hypothetical protein
21A9174_146103059978..3060208 [-], 231hypothetical protein
22A9174_146153060267..3061895 [-], 1629chaperonin GroL
23A9174_146203061951..3062265 [-], 315co-chaperone GroES
24A9174_146253062606..3062950 [+], 345hypothetical protein
25A9174_146303062974..3063243 [+], 270protein usg
 
flank Flanking regions
integrase Gene may contribute to site-specific recombination

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins14Fasta
(1) Haskett TL; Ramsay JP; Bekuma AA; Sullivan JT; O'Hara GW; Terpolilli JJ (2017). Evolutionary persistence of tripartite integrative and conjugative elements. Plasmid. 92:30-36. [PudMed:28669811]
(2) Haskett TL; Terpolilli JJ; Bekuma A; O'Hara GW; Sullivan JT; Wang P; Ronson CW; Ramsay JP (2016). Assembly and transfer of tripartite integrative and conjugative genetic elements. Proc Natl Acad Sci U S A. 113(43):12268-12273. [PudMed:27733511]