ICEberg
I. Information of ICE
ICEberg ID104
Name Tn6009 This ICE is derived from experimental literature
FamilyTn916
OrganismKlebsiella pneumoniae 41
Size (bp)-
GC content [Genome] (%)-
Insertion site-
FunctionInorganic mercury resistance, and organic mercury resistance
Species that ICE can be transferred toKlebsiella pneumoniae; Serratia liquefaciens; Pseudomonas sp.; Enterococcus sp. and Streptococcus sp.
Nucleotide SequenceEU239355; EU399632 (partial ICE sequence)
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of Tn6009 is not available.



The graph information of Tn6009 components from EU239355
Incomplete gene list of Tn6009 from EU239355
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1merT1..375 [+], 375MerT
2merA433..2076 [+], 1644MerA
3merB2384..3034 [+], 651MerB
4-3747..3866 [+], 120hypothetical protein
5-3889..4203 [+], 315hypothetical protein
6-4219..4605 [+], 387hypothetical protein
7-4634..6019 [+], 1386hypothetical proteinOrf21_Tn, T4SS component 
8-6300..7289 [+], 990hypothetical proteinRelaxase, MOBT Family
9-7332..7553 [+], 222hypothetical proteinOrf19_Tn, T4SS component 
10-7670..8167 [+], 498hypothetical protein
11-8142..8648 [+], 507hypothetical proteinOrf17_Tn, T4SS component 
12-8632..11079 [+], 2448hypothetical proteinOrf16_Tn, T4SS component 
13-11082..13346 [+], 2265hypothetical proteinOrf15_Tn, T4SS component 
14-13255..14256 [+], 1002hypothetical proteinOrf14_Tn, T4SS component 
15-14253..15185 [+], 933hypothetical proteinOrf13_Tn, T4SS component 
16-15460..15546 [+], 87hypothetical protein
17tetM15562..17481 [+], 1920tetracycline resistance protein TetMAR 
18-17579..17767 [+], 189hypothetical protein


The graph information of Tn6009 components from EU399632
Incomplete gene list of Tn6009 from EU399632
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)
*Reannotation 
1-152..403 [-], 252unknown
2xis-Tn387..590 [+], 204excisionase
3int-Tn672..1889 [+], 1218integraseIntegrase 
 
integrase Gene may contribute to site-specific recombination
conjugation Gene may play role in conjugative transfer
virulence  Gene may be involved in adaptative function

ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Soge OO; Beck NK; White TM; No DB; Roberts MC (2008). A novel transposon, Tn6009, composed of a Tn916 element linked with a Staphylococcus aureus mer operon. J Antimicrob Chemother. 62(4):674-80. [PudMed:18583328] experimental
 
experimental experimental literature